Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm28302-201ENSMUST00000187931 697 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm28646-201ENSMUST00000188220 697 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm28205-201ENSMUST00000189177 697 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm29032-201ENSMUST00000189797 697 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm28695-201ENSMUST00000190300 697 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm37448-201ENSMUST00000192795 697 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm18711-201ENSMUST00000199341 750 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.8□□□□□ -0.52
Clip4Q8CI96 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clip4Q8CI96 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.79□□□□□ -0.52
Clip4Q8CI96 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.79□□□□□ -0.52
Clip4Q8CI96 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Gm27627-201ENSMUST00000183644 150 ntBASIC11.79□□□□□ -0.52
Clip4Q8CI96 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.79□□□□□ -0.52
Clip4Q8CI96 Gm7003-201ENSMUST00000195089 312 ntBASIC11.79□□□□□ -0.52
Clip4Q8CI96 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.79□□□□□ -0.52
Clip4Q8CI96 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.79□□□□□ -0.52
Clip4Q8CI96 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.79□□□□□ -0.52
Clip4Q8CI96 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Clip4Q8CI96 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clip4Q8CI96 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clip4Q8CI96 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.78□□□□□ -0.52
Clip4Q8CI96 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clip4Q8CI96 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.78□□□□□ -0.52
Clip4Q8CI96 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clip4Q8CI96 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Clip4Q8CI96 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clip4Q8CI96 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clip4Q8CI96 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clip4Q8CI96 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clip4Q8CI96 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Clip4Q8CI96 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Clip4Q8CI96 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.78□□□□□ -0.52
Clip4Q8CI96 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clip4Q8CI96 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clip4Q8CI96 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.78□□□□□ -0.52
Clip4Q8CI96 Gm37666-201ENSMUST00000194110 866 ntBASIC11.78□□□□□ -0.52
Clip4Q8CI96 AY036118-201ENSMUST00000200021 923 ntBASIC11.78□□□□□ -0.52
Clip4Q8CI96 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.78□□□□□ -0.52
Clip4Q8CI96 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms