Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Gm20482-202ENSMUST00000174729 825 ntBASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Gm44364-201ENSMUST00000198368 141 ntBASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Gm37613-201ENSMUST00000195677 3580 ntBASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.03□□□□□ -0.32
Ccdc38Q8CDN8 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc38Q8CDN8 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Ccdc38Q8CDN8 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc38Q8CDN8 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc38Q8CDN8 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Ccdc38Q8CDN8 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc38Q8CDN8 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc38Q8CDN8 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc38Q8CDN8 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc38Q8CDN8 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Gm5616-201ENSMUST00000165252 384 ntBASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Gm8741-201ENSMUST00000174736 384 ntBASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Gm25700-201ENSMUST00000177693 110 ntBASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Gm10829-201ENSMUST00000202084 2988 ntBASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc38Q8CDN8 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Gm13437-201ENSMUST00000122434 1981 ntBASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Gm15198-201ENSMUST00000117283 177 ntBASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Gm13665-201ENSMUST00000120830 528 ntBASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Gm43822-201ENSMUST00000200285 476 ntBASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Gm2553-201ENSMUST00000215986 605 ntBASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.01□□□□□ -0.33
Ccdc38Q8CDN8 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms