Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc90bQ8C3X2 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc90bQ8C3X2 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Ccdc90bQ8C3X2 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc90bQ8C3X2 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc90bQ8C3X2 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc90bQ8C3X2 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc90bQ8C3X2 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.27□□□□□ -0.6
Ccdc90bQ8C3X2 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Ccdc90bQ8C3X2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc90bQ8C3X2 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc90bQ8C3X2 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.27□□□□□ -0.6
Ccdc90bQ8C3X2 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc90bQ8C3X2 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc90bQ8C3X2 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc90bQ8C3X2 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc90bQ8C3X2 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Gm13875-201ENSMUST00000120162 282 ntBASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc90bQ8C3X2 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.26□□□□□ -0.61
Ccdc90bQ8C3X2 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc90bQ8C3X2 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.25□□□□□ -0.61
Ccdc90bQ8C3X2 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.25□□□□□ -0.61
Ccdc90bQ8C3X2 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc90bQ8C3X2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc90bQ8C3X2 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ccdc90bQ8C3X2 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc90bQ8C3X2 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc90bQ8C3X2 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.25□□□□□ -0.61
Ccdc90bQ8C3X2 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.25□□□□□ -0.61
Ccdc90bQ8C3X2 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.25□□□□□ -0.61
Ccdc90bQ8C3X2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc90bQ8C3X2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms