Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.03□□□□□ -0.64
Ska3Q8C263 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska3Q8C263 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.02□□□□□ -0.64
Ska3Q8C263 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ska3Q8C263 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ska3Q8C263 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ska3Q8C263 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ska3Q8C263 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Ska3Q8C263 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ska3Q8C263 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ska3Q8C263 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Ska3Q8C263 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ska3Q8C263 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ska3Q8C263 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm23200-201ENSMUST00000104379 132 ntBASIC11.02□□□□□ -0.65
Ska3Q8C263 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm4909-201ENSMUST00000118749 794 ntBASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm12217-201ENSMUST00000118858 696 ntBASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm15207-201ENSMUST00000119259 442 ntBASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm23085-201ENSMUST00000157849 293 ntBASIC11.02□□□□□ -0.65
Ska3Q8C263 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm16505-201ENSMUST00000179981 232 ntBASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm8100-201ENSMUST00000182906 988 ntBASIC11.02□□□□□ -0.65
Ska3Q8C263 Mir6927-201ENSMUST00000184494 71 ntBASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm6450-201ENSMUST00000200896 574 ntBASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.02□□□□□ -0.65
Ska3Q8C263 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.02□□□□□ -0.65
Ska3Q8C263 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ska3Q8C263 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ska3Q8C263 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.02□□□□□ -0.65
Ska3Q8C263 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ska3Q8C263 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ska3Q8C263 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ska3Q8C263 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ska3Q8C263 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.01□□□□□ -0.65
Ska3Q8C263 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ska3Q8C263 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.01□□□□□ -0.65
Ska3Q8C263 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Ska3Q8C263 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.01□□□□□ -0.65
Ska3Q8C263 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.01□□□□□ -0.65
Ska3Q8C263 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.01□□□□□ -0.65
Ska3Q8C263 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ska3Q8C263 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Ska3Q8C263 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.01□□□□□ -0.65
Ska3Q8C263 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.01□□□□□ -0.65
Ska3Q8C263 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 Gm18734-201ENSMUST00000172937 808 ntBASIC11.01□□□□□ -0.65
Ska3Q8C263 Gm8815-201ENSMUST00000173809 620 ntBASIC11.01□□□□□ -0.65
Ska3Q8C263 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.01□□□□□ -0.65
Ska3Q8C263 Gm4482-201ENSMUST00000200876 742 ntBASIC11.01□□□□□ -0.65
Ska3Q8C263 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.01□□□□□ -0.65
Ska3Q8C263 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ska3Q8C263 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ska3Q8C263 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms