Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.04□□□□□ -0.48
Trub1Q8C0D0 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.04□□□□□ -0.48
Trub1Q8C0D0 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Gm8100-201ENSMUST00000182906 988 ntBASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Erich3-203ENSMUST00000189969 3460 ntBASIC12.03□□□□□ -0.48
Trub1Q8C0D0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.03□□□□□ -0.48
Trub1Q8C0D0 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trub1Q8C0D0 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trub1Q8C0D0 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trub1Q8C0D0 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trub1Q8C0D0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trub1Q8C0D0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trub1Q8C0D0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.02□□□□□ -0.48
Trub1Q8C0D0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trub1Q8C0D0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Gm14071-201ENSMUST00000117817 509 ntBASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Gm2383-201ENSMUST00000181461 807 ntBASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Gm2965-201ENSMUST00000198365 343 ntBASIC12.02□□□□□ -0.49
Trub1Q8C0D0 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trub1Q8C0D0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms