Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Gm11450-201ENSMUST00000121144 333 ntBASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Gm27530-201ENSMUST00000184096 98 ntBASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Gm28686-201ENSMUST00000187404 609 ntBASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Gm19287-201ENSMUST00000203190 358 ntBASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.15□□□□□ -0.78
Srrm4Q8BKA3 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Srrm4Q8BKA3 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Srrm4Q8BKA3 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Srrm4Q8BKA3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Srrm4Q8BKA3 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.15□□□□□ -0.79
Srrm4Q8BKA3 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.15□□□□□ -0.79
Srrm4Q8BKA3 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Srrm4Q8BKA3 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Srrm4Q8BKA3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Srrm4Q8BKA3 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Gm14724-201ENSMUST00000118400 537 ntBASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Gm8566-201ENSMUST00000120174 465 ntBASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Mir5132-201ENSMUST00000175166 71 ntBASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Gm18827-201ENSMUST00000188341 790 ntBASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Btrc-209ENSMUST00000224478 2194 ntBASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.14□□□□□ -0.79
Srrm4Q8BKA3 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Srrm4Q8BKA3 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Srrm4Q8BKA3 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Srrm4Q8BKA3 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms