Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Chmp2bQ8BJF9 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Gm11960-201ENSMUST00000122068 925 ntBASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Gm15547-201ENSMUST00000122152 333 ntBASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2bQ8BJF9 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Gm23270-201ENSMUST00000104055 131 ntBASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2bQ8BJF9 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Chmp2bQ8BJF9 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Chmp2bQ8BJF9 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp2bQ8BJF9 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp2bQ8BJF9 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.96□□□□□ -0.5
Chmp2bQ8BJF9 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Chmp2bQ8BJF9 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp2bQ8BJF9 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Chmp2bQ8BJF9 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp2bQ8BJF9 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp2bQ8BJF9 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.96□□□□□ -0.5
Chmp2bQ8BJF9 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp2bQ8BJF9 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms