Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 BC043934-202ENSMUST00000185694 2356 ntBASIC11.24□□□□□ -0.61
SynbQ8BI41 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
SynbQ8BI41 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.24□□□□□ -0.61
SynbQ8BI41 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.24□□□□□ -0.61
SynbQ8BI41 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.24□□□□□ -0.61
SynbQ8BI41 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.24□□□□□ -0.61
SynbQ8BI41 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.24□□□□□ -0.61
SynbQ8BI41 Mir7686-201ENSMUST00000200604 57 ntBASIC11.24□□□□□ -0.61
SynbQ8BI41 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SynbQ8BI41 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.24□□□□□ -0.61
SynbQ8BI41 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.24□□□□□ -0.61
SynbQ8BI41 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SynbQ8BI41 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.24□□□□□ -0.61
SynbQ8BI41 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.24□□□□□ -0.61
SynbQ8BI41 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.24□□□□□ -0.61
SynbQ8BI41 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.24□□□□□ -0.61
SynbQ8BI41 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.24□□□□□ -0.61
SynbQ8BI41 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynbQ8BI41 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.24□□□□□ -0.61
SynbQ8BI41 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.24□□□□□ -0.61
SynbQ8BI41 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SynbQ8BI41 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
SynbQ8BI41 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SynbQ8BI41 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.23□□□□□ -0.61
SynbQ8BI41 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SynbQ8BI41 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.23□□□□□ -0.61
SynbQ8BI41 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.23□□□□□ -0.61
SynbQ8BI41 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.23□□□□□ -0.61
SynbQ8BI41 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.23□□□□□ -0.61
SynbQ8BI41 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.23□□□□□ -0.61
SynbQ8BI41 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.23□□□□□ -0.61
SynbQ8BI41 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.23□□□□□ -0.61
SynbQ8BI41 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.23□□□□□ -0.61
SynbQ8BI41 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.23□□□□□ -0.61
SynbQ8BI41 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
SynbQ8BI41 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SynbQ8BI41 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.23□□□□□ -0.61
SynbQ8BI41 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SynbQ8BI41 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms