Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.93□□□□□ -0.66
Pif1Q80SX8 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Gm14193-201ENSMUST00000105067 153 ntBASIC10.93□□□□□ -0.66
Pif1Q80SX8 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Gm15004-201ENSMUST00000119192 630 ntBASIC10.93□□□□□ -0.66
Pif1Q80SX8 Gm15207-201ENSMUST00000119259 442 ntBASIC10.93□□□□□ -0.66
Pif1Q80SX8 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.93□□□□□ -0.66
Pif1Q80SX8 Gm12516-201ENSMUST00000120819 385 ntBASIC10.93□□□□□ -0.66
Pif1Q80SX8 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.93□□□□□ -0.66
Pif1Q80SX8 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Gm23045-201ENSMUST00000175041 96 ntBASIC10.93□□□□□ -0.66
Pif1Q80SX8 Mir7076-201ENSMUST00000183519 74 ntBASIC10.93□□□□□ -0.66
Pif1Q80SX8 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Gm29155-201ENSMUST00000185910 269 ntBASIC10.93□□□□□ -0.66
Pif1Q80SX8 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.93□□□□□ -0.66
Pif1Q80SX8 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.93□□□□□ -0.66
Pif1Q80SX8 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.93□□□□□ -0.66
Pif1Q80SX8 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pif1Q80SX8 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.93□□□□□ -0.66
Pif1Q80SX8 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.93□□□□□ -0.66
Pif1Q80SX8 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Rpl7l1-201ENSMUST00000078286 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pif1Q80SX8 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.92□□□□□ -0.66
Pif1Q80SX8 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm38227-201ENSMUST00000193036 1602 ntBASIC10.92□□□□□ -0.66
Pif1Q80SX8 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm22920-201ENSMUST00000102175 109 ntBASIC10.92□□□□□ -0.66
Pif1Q80SX8 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm6485-201ENSMUST00000160676 439 ntBASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm25072-201ENSMUST00000175233 235 ntBASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm29499-201ENSMUST00000189151 486 ntBASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm28329-201ENSMUST00000191208 689 ntBASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm29171-201ENSMUST00000191397 486 ntBASIC10.92□□□□□ -0.66
Pif1Q80SX8 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm9645-201ENSMUST00000197131 792 ntBASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm43186-201ENSMUST00000198130 824 ntBASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC10.92□□□□□ -0.66
Pif1Q80SX8 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.92□□□□□ -0.66
Pif1Q80SX8 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms