Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.92□□□□□ -0.82
Rif1Q6PR54 Gm18010-201ENSMUST00000203553 202 ntBASIC9.92□□□□□ -0.82
Rif1Q6PR54 Gm5194-201ENSMUST00000221457 742 ntBASIC9.92□□□□□ -0.82
Rif1Q6PR54 AC115304.2-201ENSMUST00000226399 332 ntBASIC9.92□□□□□ -0.82
Rif1Q6PR54 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Rif1Q6PR54 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Gm5419-201ENSMUST00000119301 527 ntBASIC9.91□□□□□ -0.82
Rif1Q6PR54 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Gm26976-201ENSMUST00000182929 908 ntBASIC9.91□□□□□ -0.82
Rif1Q6PR54 Gm43163-201ENSMUST00000196571 442 ntBASIC9.91□□□□□ -0.82
Rif1Q6PR54 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC9.91□□□□□ -0.82
Rif1Q6PR54 Gm45090-201ENSMUST00000208775 1148 ntBASIC9.91□□□□□ -0.82
Rif1Q6PR54 Gm5191-201ENSMUST00000222882 1236 ntBASIC9.91□□□□□ -0.82
Rif1Q6PR54 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.91□□□□□ -0.82
Rif1Q6PR54 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Gm13422-201ENSMUST00000118834 504 ntBASIC9.91□□□□□ -0.82
Rif1Q6PR54 Coa4-202ENSMUST00000120454 742 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.91□□□□□ -0.82
Rif1Q6PR54 Gm27444-201ENSMUST00000184157 137 ntBASIC9.91□□□□□ -0.82
Rif1Q6PR54 Ighv5-8-202ENSMUST00000191967 337 ntBASIC9.91□□□□□ -0.82
Rif1Q6PR54 Gm38301-201ENSMUST00000195573 543 ntBASIC9.91□□□□□ -0.82
Rif1Q6PR54 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
Rif1Q6PR54 AC107711.4-201ENSMUST00000228948 440 ntBASIC9.91□□□□□ -0.82
Rif1Q6PR54 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Olfr584-201ENSMUST00000098210 964 ntBASIC9.91□□□□□ -0.82
Rif1Q6PR54 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rif1Q6PR54 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.9□□□□□ -0.82
Rif1Q6PR54 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Gm15615-201ENSMUST00000118876 198 ntBASIC9.9□□□□□ -0.82
Rif1Q6PR54 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Gm32102-201ENSMUST00000196885 241 ntBASIC9.9□□□□□ -0.82
Rif1Q6PR54 Gm4903-201ENSMUST00000210462 405 ntBASIC9.9□□□□□ -0.82
Rif1Q6PR54 AC164614.1-201ENSMUST00000216038 397 ntBASIC9.9□□□□□ -0.82
Rif1Q6PR54 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Btg1-201ENSMUST00000038377 5001 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rif1Q6PR54 2410002F23Rik-202ENSMUST00000071296 4201 ntAPPRIS P2 TSL 2 BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rif1Q6PR54 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms