Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Gm17150-201ENSMUST00000165577 381 ntBASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.51□□□□□ -0.57
Scaf4Q6PFF0 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Mospd4-201ENSMUST00000180618 576 ntBASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Gm9230-201ENSMUST00000188228 532 ntBASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Gm4607-201ENSMUST00000206649 577 ntBASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Scaf4Q6PFF0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Gm27514-201ENSMUST00000183692 110 ntBASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Gm45784-201ENSMUST00000188360 142 ntBASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Gm18065-201ENSMUST00000221395 526 ntBASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms