Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Gm20414-201ENSMUST00000172918 646 ntBASIC13.55□□□□□ -0.24
Nup98Q6PFD9 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Gm40879-201ENSMUST00000220759 612 ntBASIC13.55□□□□□ -0.24
Nup98Q6PFD9 AC115304.2-201ENSMUST00000226399 332 ntBASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Gm26670-202ENSMUST00000226862 340 ntBASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Gm25580-201ENSMUST00000083409 327 ntBASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nup98Q6PFD9 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Gm26272-201ENSMUST00000179241 132 ntBASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Gm44647-201ENSMUST00000207402 428 ntBASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Gm7536-201ENSMUST00000077389 444 ntBASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.54□□□□□ -0.24
Nup98Q6PFD9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nup98Q6PFD9 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm4753-201ENSMUST00000188327 1255 ntBASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm5700-201ENSMUST00000191483 989 ntBASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm13549-201ENSMUST00000118339 796 ntBASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm11354-201ENSMUST00000121974 422 ntBASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm22146-201ENSMUST00000157397 288 ntBASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms