Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Gm17192-201ENSMUST00000169031 511 ntBASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Gm28833-201ENSMUST00000189671 559 ntBASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc85bQ6PDY0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 AC154849.3-201ENSMUST00000223733 1660 ntBASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Gm24279-201ENSMUST00000104236 131 ntBASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Gm9162-201ENSMUST00000182081 991 ntBASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Gm43380-201ENSMUST00000200421 220 ntBASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Gm32390-201ENSMUST00000212713 1172 ntBASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Olfr584-201ENSMUST00000098210 964 ntBASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc85bQ6PDY0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc85bQ6PDY0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc85bQ6PDY0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc85bQ6PDY0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.22□□□□□ -0.45
Ccdc85bQ6PDY0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc85bQ6PDY0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc85bQ6PDY0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc85bQ6PDY0 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc85bQ6PDY0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc85bQ6PDY0 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc85bQ6PDY0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc85bQ6PDY0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc85bQ6PDY0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc85bQ6PDY0 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ccdc85bQ6PDY0 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc85bQ6PDY0 Gm13204-201ENSMUST00000120110 821 ntBASIC12.22□□□□□ -0.45
Ccdc85bQ6PDY0 Gm9089-201ENSMUST00000122027 526 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms