Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Gm9797-202ENSMUST00000218003 294 ntBASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Gm15515-201ENSMUST00000117827 822 ntBASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Gm12501-201ENSMUST00000119163 529 ntBASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Gm6450-201ENSMUST00000200896 574 ntBASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Gm7848-201ENSMUST00000210739 718 ntBASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Gm21811-201ENSMUST00000096485 930 ntBASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcc2Q6PDG5 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Gm11450-201ENSMUST00000121144 333 ntBASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Gm28686-201ENSMUST00000187404 609 ntBASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Gm10254-201ENSMUST00000052888 867 ntBASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms