Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slx4Q6P1D7 Nupl1-206ENSMUST00000225111 2936 ntBASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Gm11993-201ENSMUST00000121861 820 ntBASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Gm8234-201ENSMUST00000198523 1107 ntBASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 CT025624.1-201ENSMUST00000224007 2700 ntBASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC17.71■□□□□ 0.43
Slx4Q6P1D7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.42
Slx4Q6P1D7 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Gm5395-201ENSMUST00000121650 915 ntBASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Gm27440-201ENSMUST00000184785 107 ntBASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Gm42751-201ENSMUST00000198065 559 ntBASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Gm45003-201ENSMUST00000205875 2158 ntBASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Gm38194-201ENSMUST00000194529 2211 ntBASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Gm8019-201ENSMUST00000119317 587 ntBASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Gm8152-201ENSMUST00000120842 637 ntBASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Gm5529-201ENSMUST00000165691 891 ntBASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Gm43564-201ENSMUST00000196185 211 ntBASIC17.7■□□□□ 0.42
Slx4Q6P1D7 AC154436.1-201ENSMUST00000227272 782 ntBASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Gm7589-201ENSMUST00000085631 534 ntBASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slx4Q6P1D7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Mir744-201ENSMUST00000103261 100 ntBASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Gm6548-201ENSMUST00000167498 1165 ntBASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Gm6653-201ENSMUST00000218063 1288 ntBASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms