Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Paupar-201ENSMUST00000194826 3482 ntBASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Pdzrn3Q69ZS0 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pdzrn3Q69ZS0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdzrn3Q69ZS0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pdzrn3Q69ZS0 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pdzrn3Q69ZS0 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Gm26013-201ENSMUST00000104404 119 ntBASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Gm15610-201ENSMUST00000120584 195 ntBASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Gm24844-201ENSMUST00000158679 127 ntBASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Gm38117-201ENSMUST00000194653 939 ntBASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Gm42657-201ENSMUST00000201746 211 ntBASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Gm43852-201ENSMUST00000202098 917 ntBASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 AC166344.1-201ENSMUST00000223745 674 ntBASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Gm25517-201ENSMUST00000083865 134 ntBASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.33□□□□□ -0.12
Pdzrn3Q69ZS0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Gm25951-201ENSMUST00000175330 64 ntBASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Gm12407-201ENSMUST00000180219 324 ntBASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pdzrn3Q69ZS0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Gm25076-201ENSMUST00000104098 132 ntBASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Gm14942-201ENSMUST00000119642 336 ntBASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 Gm5706-201ENSMUST00000181525 993 ntBASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pdzrn3Q69ZS0 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms