Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm43371-201ENSMUST00000202838 1031 ntBASIC12.89□□□□□ -0.35
Ecm1Q61508 Gm18204-201ENSMUST00000209835 793 ntBASIC12.89□□□□□ -0.35
Ecm1Q61508 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ecm1Q61508 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.89□□□□□ -0.35
Ecm1Q61508 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ecm1Q61508 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ecm1Q61508 Gm7536-201ENSMUST00000077389 444 ntBASIC12.89□□□□□ -0.35
Ecm1Q61508 Gm5453-201ENSMUST00000080866 447 ntBASIC12.89□□□□□ -0.35
Ecm1Q61508 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ecm1Q61508 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ecm1Q61508 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ecm1Q61508 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ecm1Q61508 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Ecm1Q61508 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.89□□□□□ -0.35
Ecm1Q61508 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ecm1Q61508 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.89□□□□□ -0.35
Ecm1Q61508 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ecm1Q61508 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ecm1Q61508 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ecm1Q61508 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ecm1Q61508 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ecm1Q61508 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Ecm1Q61508 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ecm1Q61508 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.89□□□□□ -0.35
Ecm1Q61508 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ecm1Q61508 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ecm1Q61508 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ecm1Q61508 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.88□□□□□ -0.35
Ecm1Q61508 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.88□□□□□ -0.35
Ecm1Q61508 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ecm1Q61508 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ecm1Q61508 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Ecm1Q61508 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Gm15003-201ENSMUST00000118884 446 ntBASIC12.88□□□□□ -0.35
Ecm1Q61508 Gm8302-201ENSMUST00000119217 852 ntBASIC12.88□□□□□ -0.35
Ecm1Q61508 Gm15197-201ENSMUST00000120526 478 ntBASIC12.88□□□□□ -0.35
Ecm1Q61508 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.88□□□□□ -0.35
Ecm1Q61508 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.88□□□□□ -0.35
Ecm1Q61508 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.88□□□□□ -0.35
Ecm1Q61508 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.88□□□□□ -0.35
Ecm1Q61508 Gm29067-201ENSMUST00000190821 470 ntBASIC12.88□□□□□ -0.35
Ecm1Q61508 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Gm5599-201ENSMUST00000209602 788 ntBASIC12.88□□□□□ -0.35
Ecm1Q61508 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.88□□□□□ -0.35
Ecm1Q61508 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.88□□□□□ -0.35
Ecm1Q61508 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Ecm1Q61508 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.88□□□□□ -0.35
Ecm1Q61508 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.88□□□□□ -0.35
Ecm1Q61508 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ecm1Q61508 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ecm1Q61508 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.88□□□□□ -0.35
Ecm1Q61508 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ecm1Q61508 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ecm1Q61508 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ecm1Q61508 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.87□□□□□ -0.35
Ecm1Q61508 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ecm1Q61508 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ecm1Q61508 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ecm1Q61508 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ecm1Q61508 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ecm1Q61508 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ecm1Q61508 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ecm1Q61508 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ecm1Q61508 Gm25148-201ENSMUST00000104611 123 ntBASIC12.87□□□□□ -0.35
Ecm1Q61508 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.87□□□□□ -0.35
Ecm1Q61508 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Ecm1Q61508 Mir1905-201ENSMUST00000122779 82 ntBASIC12.87□□□□□ -0.35
Ecm1Q61508 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ecm1Q61508 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms