Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.64□□□□□ -0.23
Prdm1Q60636 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.64□□□□□ -0.23
Prdm1Q60636 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Prdm1Q60636 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.64□□□□□ -0.23
Prdm1Q60636 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prdm1Q60636 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Prdm1Q60636 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.63□□□□□ -0.23
Prdm1Q60636 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.63□□□□□ -0.23
Prdm1Q60636 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Prdm1Q60636 Gm9062-201ENSMUST00000117712 727 ntBASIC13.63□□□□□ -0.23
Prdm1Q60636 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.63□□□□□ -0.23
Prdm1Q60636 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Gm44100-201ENSMUST00000204329 436 ntBASIC13.63□□□□□ -0.23
Prdm1Q60636 Gm6905-201ENSMUST00000205729 511 ntBASIC13.63□□□□□ -0.23
Prdm1Q60636 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.63□□□□□ -0.23
Prdm1Q60636 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.63□□□□□ -0.23
Prdm1Q60636 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.63□□□□□ -0.23
Prdm1Q60636 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.63□□□□□ -0.23
Prdm1Q60636 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Prdm1Q60636 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prdm1Q60636 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.62□□□□□ -0.23
Prdm1Q60636 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.62□□□□□ -0.23
Prdm1Q60636 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.62□□□□□ -0.23
Prdm1Q60636 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.62□□□□□ -0.23
Prdm1Q60636 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.62□□□□□ -0.23
Prdm1Q60636 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Prdm1Q60636 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Prdm1Q60636 Gm43138-201ENSMUST00000199123 708 ntBASIC13.62□□□□□ -0.23
Prdm1Q60636 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Prdm1Q60636 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.62□□□□□ -0.23
Prdm1Q60636 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.62□□□□□ -0.23
Prdm1Q60636 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Prdm1Q60636 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Prdm1Q60636 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.62□□□□□ -0.23
Prdm1Q60636 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.62□□□□□ -0.23
Prdm1Q60636 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms