Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm4654-201ENSMUST00000183305 982 ntBASIC14□□□□□ -0.17
Vps54Q5SPW0 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14□□□□□ -0.17
Vps54Q5SPW0 Gm43186-201ENSMUST00000198130 824 ntBASIC14□□□□□ -0.17
Vps54Q5SPW0 Gm17831-201ENSMUST00000205579 900 ntBASIC14□□□□□ -0.17
Vps54Q5SPW0 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Lect2-202ENSMUST00000225183 823 ntBASIC14□□□□□ -0.17
Vps54Q5SPW0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14□□□□□ -0.17
Vps54Q5SPW0 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC14□□□□□ -0.17
Vps54Q5SPW0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vps54Q5SPW0 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vps54Q5SPW0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vps54Q5SPW0 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Vps54Q5SPW0 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.99□□□□□ -0.17
Vps54Q5SPW0 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Gm14263-201ENSMUST00000117955 746 ntBASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Gm10731-201ENSMUST00000181171 448 ntBASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Gm7504-201ENSMUST00000201449 424 ntBASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Gm2517-201ENSMUST00000215651 348 ntBASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.99□□□□□ -0.17
Vps54Q5SPW0 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps54Q5SPW0 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Gm12419-201ENSMUST00000116649 636 ntBASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.98□□□□□ -0.17
Vps54Q5SPW0 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Gm18065-201ENSMUST00000221395 526 ntBASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.98□□□□□ -0.17
Vps54Q5SPW0 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Olfr584-201ENSMUST00000098210 964 ntBASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps54Q5SPW0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms