Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gm13996-201ENSMUST00000118456 430 ntBASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 AY036118-201ENSMUST00000200021 923 ntBASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gm4157-201ENSMUST00000211647 679 ntBASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav5d-4Q5R1F6 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav5d-4Q5R1F6 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav5d-4Q5R1F6 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav5d-4Q5R1F6 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav5d-4Q5R1F6 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav5d-4Q5R1F6 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav5d-4Q5R1F6 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav5d-4Q5R1F6 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav5d-4Q5R1F6 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav5d-4Q5R1F6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Gm26083-201ENSMUST00000157904 193 ntBASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Gm38314-201ENSMUST00000195709 625 ntBASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Gm43184-201ENSMUST00000197247 542 ntBASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Gm45433-201ENSMUST00000209386 247 ntBASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav5d-4Q5R1F6 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms