Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.79□□□□□ -0.68
Urb1Q571H0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Urb1Q571H0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Urb1Q571H0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Urb1Q571H0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.78□□□□□ -0.68
Urb1Q571H0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.78□□□□□ -0.68
Urb1Q571H0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.78□□□□□ -0.68
Urb1Q571H0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Gm24791-201ENSMUST00000104284 131 ntBASIC10.78□□□□□ -0.68
Urb1Q571H0 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Urb1Q571H0 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.78□□□□□ -0.68
Urb1Q571H0 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.78□□□□□ -0.68
Urb1Q571H0 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.78□□□□□ -0.68
Urb1Q571H0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Urb1Q571H0 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Urb1Q571H0 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.78□□□□□ -0.68
Urb1Q571H0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Urb1Q571H0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.78□□□□□ -0.68
Urb1Q571H0 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Gm23272-201ENSMUST00000104053 129 ntBASIC10.78□□□□□ -0.68
Urb1Q571H0 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.78□□□□□ -0.68
Urb1Q571H0 Gm11979-201ENSMUST00000119629 743 ntBASIC10.78□□□□□ -0.68
Urb1Q571H0 Gm25604-201ENSMUST00000158359 133 ntBASIC10.78□□□□□ -0.68
Urb1Q571H0 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Gm7719-201ENSMUST00000182374 975 ntBASIC10.78□□□□□ -0.68
Urb1Q571H0 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Urb1Q571H0 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Urb1Q571H0 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Urb1Q571H0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.78□□□□□ -0.68
Urb1Q571H0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Urb1Q571H0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Urb1Q571H0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.78□□□□□ -0.68
Urb1Q571H0 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.78□□□□□ -0.68
Urb1Q571H0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Urb1Q571H0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Urb1Q571H0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Urb1Q571H0 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Urb1Q571H0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Urb1Q571H0 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Urb1Q571H0 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Urb1Q571H0 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Urb1Q571H0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Urb1Q571H0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Urb1Q571H0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Urb1Q571H0 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Urb1Q571H0 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.77□□□□□ -0.68
Urb1Q571H0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Urb1Q571H0 Gm23912-201ENSMUST00000104687 87 ntBASIC10.77□□□□□ -0.69
Urb1Q571H0 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Urb1Q571H0 Gm13019-201ENSMUST00000120000 276 ntBASIC10.77□□□□□ -0.69
Urb1Q571H0 Gm15620-201ENSMUST00000122949 270 ntBASIC10.77□□□□□ -0.69
Urb1Q571H0 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.77□□□□□ -0.69
Urb1Q571H0 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.77□□□□□ -0.69
Urb1Q571H0 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Urb1Q571H0 Gm8815-201ENSMUST00000173809 620 ntBASIC10.77□□□□□ -0.69
Urb1Q571H0 Gm38117-201ENSMUST00000194653 939 ntBASIC10.77□□□□□ -0.69
Urb1Q571H0 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Urb1Q571H0 Gm44953-201ENSMUST00000208745 1286 ntBASIC10.77□□□□□ -0.69
Urb1Q571H0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Urb1Q571H0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Urb1Q571H0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Urb1Q571H0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.77□□□□□ -0.69
Urb1Q571H0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Urb1Q571H0 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.77□□□□□ -0.69
Urb1Q571H0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Urb1Q571H0 Gm25063-201ENSMUST00000104666 94 ntBASIC10.77□□□□□ -0.69
Urb1Q571H0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Urb1Q571H0 Gm14807-201ENSMUST00000116640 983 ntBASIC10.77□□□□□ -0.69
Urb1Q571H0 Gm11619-201ENSMUST00000117474 237 ntBASIC10.77□□□□□ -0.69
Urb1Q571H0 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.77□□□□□ -0.69
Urb1Q571H0 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.77□□□□□ -0.69
Urb1Q571H0 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Urb1Q571H0 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.77□□□□□ -0.69
Urb1Q571H0 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms