Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm11354-201ENSMUST00000121974 422 ntBASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Gm9136-201ENSMUST00000193368 454 ntBASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Gm18204-201ENSMUST00000209835 793 ntBASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx49Q4FZF3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Gm13117-201ENSMUST00000120894 691 ntBASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Gm9089-201ENSMUST00000122027 526 ntBASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Gm8723-201ENSMUST00000166076 820 ntBASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Gm8701-201ENSMUST00000169259 874 ntBASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Gm3726-201ENSMUST00000203110 785 ntBASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Gm18460-201ENSMUST00000208088 464 ntBASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx49Q4FZF3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ddx49Q4FZF3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ddx49Q4FZF3 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Gm7541-201ENSMUST00000118361 535 ntBASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Gm15036-201ENSMUST00000118880 400 ntBASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Gm10169-201ENSMUST00000121822 348 ntBASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Gm8459-201ENSMUST00000162504 760 ntBASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms