Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Brf2Q3UAW9 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm28937-201ENSMUST00000185413 695 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm29400-201ENSMUST00000187208 695 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm28662-201ENSMUST00000188446 695 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm28251-201ENSMUST00000188835 695 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm37318-201ENSMUST00000194325 695 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm38117-201ENSMUST00000194653 939 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm38017-201ENSMUST00000194768 695 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm37287-201ENSMUST00000195449 695 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm37793-201ENSMUST00000195548 695 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm38314-201ENSMUST00000195709 625 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm44262-201ENSMUST00000204969 372 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm45433-201ENSMUST00000209386 247 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Brf2Q3UAW9 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Brf2Q3UAW9 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Brf2Q3UAW9 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11□□□□□ -0.65
Brf2Q3UAW9 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11□□□□□ -0.65
Brf2Q3UAW9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Brf2Q3UAW9 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11□□□□□ -0.65
Brf2Q3UAW9 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Mir7677-201ENSMUST00000184226 67 ntBASIC11□□□□□ -0.65
Brf2Q3UAW9 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11□□□□□ -0.65
Brf2Q3UAW9 Gm28071-201ENSMUST00000190355 478 ntBASIC11□□□□□ -0.65
Brf2Q3UAW9 Gm18038-201ENSMUST00000197900 485 ntBASIC11□□□□□ -0.65
Brf2Q3UAW9 Gm6450-201ENSMUST00000200896 574 ntBASIC11□□□□□ -0.65
Brf2Q3UAW9 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11□□□□□ -0.65
Brf2Q3UAW9 Gm9797-202ENSMUST00000218003 294 ntBASIC11□□□□□ -0.65
Brf2Q3UAW9 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11□□□□□ -0.65
Brf2Q3UAW9 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11□□□□□ -0.65
Brf2Q3UAW9 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11□□□□□ -0.65
Brf2Q3UAW9 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Brf2Q3UAW9 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11□□□□□ -0.65
Brf2Q3UAW9 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms