Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Mir8109-201ENSMUST00000184375 117 ntBASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Gm45865-201ENSMUST00000211815 945 ntBASIC12.4□□□□□ -0.42
Trim43aQ3TL54 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43aQ3TL54 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
Trim43aQ3TL54 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.4□□□□□ -0.43
Trim43aQ3TL54 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim43aQ3TL54 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Erich3-203ENSMUST00000189969 3460 ntBASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Gm14381-201ENSMUST00000122105 414 ntBASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim43aQ3TL54 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Btrc-209ENSMUST00000224478 2194 ntBASIC12.38□□□□□ -0.43
Trim43aQ3TL54 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Gm27320-201ENSMUST00000184892 109 ntBASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Gm43758-201ENSMUST00000199500 367 ntBASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.38□□□□□ -0.43
Trim43aQ3TL54 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim43aQ3TL54 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms