Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col6a1Q04857 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.95□□□□□ -0.34
Col6a1Q04857 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Gm24791-201ENSMUST00000104284 131 ntBASIC12.95□□□□□ -0.34
Col6a1Q04857 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col6a1Q04857 Gm12419-201ENSMUST00000116649 636 ntBASIC12.95□□□□□ -0.34
Col6a1Q04857 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.95□□□□□ -0.34
Col6a1Q04857 Gm25604-201ENSMUST00000158359 133 ntBASIC12.95□□□□□ -0.34
Col6a1Q04857 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.95□□□□□ -0.34
Col6a1Q04857 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.95□□□□□ -0.34
Col6a1Q04857 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.95□□□□□ -0.34
Col6a1Q04857 Gm43752-201ENSMUST00000198475 697 ntBASIC12.95□□□□□ -0.34
Col6a1Q04857 Gm3726-201ENSMUST00000203110 785 ntBASIC12.95□□□□□ -0.34
Col6a1Q04857 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.95□□□□□ -0.34
Col6a1Q04857 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.95□□□□□ -0.34
Col6a1Q04857 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.95□□□□□ -0.34
Col6a1Q04857 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a1Q04857 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col6a1Q04857 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a1Q04857 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a1Q04857 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a1Q04857 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Col6a1Q04857 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.94□□□□□ -0.34
Col6a1Q04857 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col6a1Q04857 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.94□□□□□ -0.34
Col6a1Q04857 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.94□□□□□ -0.34
Col6a1Q04857 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.94□□□□□ -0.34
Col6a1Q04857 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col6a1Q04857 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.94□□□□□ -0.34
Col6a1Q04857 Gm3150-201ENSMUST00000166418 204 ntBASIC12.94□□□□□ -0.34
Col6a1Q04857 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Gm44647-201ENSMUST00000207402 428 ntBASIC12.94□□□□□ -0.34
Col6a1Q04857 Gm8342-201ENSMUST00000209839 757 ntBASIC12.94□□□□□ -0.34
Col6a1Q04857 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.94□□□□□ -0.34
Col6a1Q04857 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.94□□□□□ -0.34
Col6a1Q04857 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Col6a1Q04857 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col6a1Q04857 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a1Q04857 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a1Q04857 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col6a1Q04857 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a1Q04857 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.93□□□□□ -0.34
Col6a1Q04857 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col6a1Q04857 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a1Q04857 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a1Q04857 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a1Q04857 Gm14760-201ENSMUST00000121831 999 ntBASIC12.93□□□□□ -0.34
Col6a1Q04857 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a1Q04857 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.93□□□□□ -0.34
Col6a1Q04857 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a1Q04857 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a1Q04857 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.93□□□□□ -0.34
Col6a1Q04857 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a1Q04857 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a1Q04857 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.93□□□□□ -0.34
Col6a1Q04857 Gm18514-201ENSMUST00000218980 436 ntBASIC12.93□□□□□ -0.34
Col6a1Q04857 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.93□□□□□ -0.34
Col6a1Q04857 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col6a1Q04857 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.93□□□□□ -0.34
Col6a1Q04857 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col6a1Q04857 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col6a1Q04857 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.93□□□□□ -0.34
Col6a1Q04857 Gm5451-201ENSMUST00000080545 579 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms