Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn6Q03958 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn6Q03958 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn6Q03958 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn6Q03958 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn6Q03958 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Pfdn6Q03958 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn6Q03958 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn6Q03958 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pfdn6Q03958 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.77□□□□□ -0.53
Pfdn6Q03958 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Gm25890-201ENSMUST00000177643 165 ntBASIC11.77□□□□□ -0.53
Pfdn6Q03958 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.77□□□□□ -0.53
Pfdn6Q03958 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.77□□□□□ -0.53
Pfdn6Q03958 Gm22614-201ENSMUST00000178300 165 ntBASIC11.77□□□□□ -0.53
Pfdn6Q03958 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Gm17812-201ENSMUST00000204935 318 ntBASIC11.77□□□□□ -0.53
Pfdn6Q03958 Gm44967-201ENSMUST00000207047 631 ntBASIC11.77□□□□□ -0.53
Pfdn6Q03958 Gm17827-201ENSMUST00000211825 742 ntBASIC11.77□□□□□ -0.53
Pfdn6Q03958 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Gm22042-201ENSMUST00000082989 165 ntBASIC11.77□□□□□ -0.53
Pfdn6Q03958 Gm26110-201ENSMUST00000083971 165 ntBASIC11.77□□□□□ -0.53
Pfdn6Q03958 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.77□□□□□ -0.53
Pfdn6Q03958 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.77□□□□□ -0.53
Pfdn6Q03958 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn6Q03958 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.76□□□□□ -0.53
Pfdn6Q03958 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Gm25700-201ENSMUST00000177693 110 ntBASIC11.76□□□□□ -0.53
Pfdn6Q03958 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.76□□□□□ -0.53
Pfdn6Q03958 AY036118-201ENSMUST00000200021 923 ntBASIC11.76□□□□□ -0.53
Pfdn6Q03958 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.76□□□□□ -0.53
Pfdn6Q03958 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.76□□□□□ -0.53
Pfdn6Q03958 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.76□□□□□ -0.53
Pfdn6Q03958 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pfdn6Q03958 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.76□□□□□ -0.53
Pfdn6Q03958 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms