Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Col8a1Q00780 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.02□□□□□ -0.81
Col8a1Q00780 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Gm12419-201ENSMUST00000116649 636 ntBASIC10.02□□□□□ -0.81
Col8a1Q00780 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.02□□□□□ -0.81
Col8a1Q00780 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.02□□□□□ -0.81
Col8a1Q00780 Gm8451-201ENSMUST00000170338 447 ntBASIC10.02□□□□□ -0.81
Col8a1Q00780 Gm4310-201ENSMUST00000177847 889 ntBASIC10.02□□□□□ -0.81
Col8a1Q00780 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.02□□□□□ -0.81
Col8a1Q00780 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.02□□□□□ -0.81
Col8a1Q00780 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Mir6941-201ENSMUST00000184711 59 ntBASIC10.02□□□□□ -0.81
Col8a1Q00780 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Gm42433-201ENSMUST00000196806 940 ntBASIC10.02□□□□□ -0.81
Col8a1Q00780 Gm43852-201ENSMUST00000202098 917 ntBASIC10.02□□□□□ -0.81
Col8a1Q00780 Gm8342-201ENSMUST00000209839 757 ntBASIC10.02□□□□□ -0.81
Col8a1Q00780 BC106175-202ENSMUST00000219344 1213 ntBASIC10.02□□□□□ -0.81
Col8a1Q00780 Gm7536-201ENSMUST00000077389 444 ntBASIC10.02□□□□□ -0.81
Col8a1Q00780 Gm5453-201ENSMUST00000080866 447 ntBASIC10.02□□□□□ -0.81
Col8a1Q00780 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.02□□□□□ -0.81
Col8a1Q00780 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Col8a1Q00780 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col8a1Q00780 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Col8a1Q00780 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a1Q00780 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a1Q00780 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a1Q00780 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a1Q00780 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a1Q00780 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a1Q00780 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a1Q00780 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Col8a1Q00780 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Col8a1Q00780 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a1Q00780 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a1Q00780 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Col8a1Q00780 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a1Q00780 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Col8a1Q00780 Gm15004-201ENSMUST00000119192 630 ntBASIC10.01□□□□□ -0.81
Col8a1Q00780 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.01□□□□□ -0.81
Col8a1Q00780 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a1Q00780 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a1Q00780 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a1Q00780 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.01□□□□□ -0.81
Col8a1Q00780 Gm26134-201ENSMUST00000178484 110 ntBASIC10.01□□□□□ -0.81
Col8a1Q00780 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.01□□□□□ -0.81
Col8a1Q00780 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Col8a1Q00780 Gm9507-202ENSMUST00000180157 654 ntBASIC10.01□□□□□ -0.81
Col8a1Q00780 Gm12407-201ENSMUST00000180219 324 ntBASIC10.01□□□□□ -0.81
Col8a1Q00780 Gm21156-201ENSMUST00000189693 869 ntBASIC10.01□□□□□ -0.81
Col8a1Q00780 Gm44315-201ENSMUST00000203041 219 ntBASIC10.01□□□□□ -0.81
Col8a1Q00780 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a1Q00780 Gm45135-201ENSMUST00000206787 1184 ntBASIC10.01□□□□□ -0.81
Col8a1Q00780 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Col8a1Q00780 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.01□□□□□ -0.81
Col8a1Q00780 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC10.01□□□□□ -0.81
Col8a1Q00780 Gm6390-201ENSMUST00000215034 589 ntBASIC10.01□□□□□ -0.81
Col8a1Q00780 Olfr692-202ENSMUST00000217827 1126 ntBASIC10.01□□□□□ -0.81
Col8a1Q00780 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Col8a1Q00780 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Col8a1Q00780 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Col8a1Q00780 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms