Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
GabpaQ00422 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.24□□□□□ -0.29
GabpaQ00422 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.24□□□□□ -0.29
GabpaQ00422 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.24□□□□□ -0.29
GabpaQ00422 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
GabpaQ00422 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.24□□□□□ -0.29
GabpaQ00422 Gm25766-201ENSMUST00000104101 131 ntBASIC13.24□□□□□ -0.29
GabpaQ00422 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Gm15374-201ENSMUST00000119313 844 ntBASIC13.24□□□□□ -0.29
GabpaQ00422 Gm14395-201ENSMUST00000120494 563 ntBASIC13.24□□□□□ -0.29
GabpaQ00422 Gm22442-201ENSMUST00000157256 144 ntBASIC13.24□□□□□ -0.29
GabpaQ00422 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Gm7741-201ENSMUST00000181445 989 ntBASIC13.24□□□□□ -0.29
GabpaQ00422 Gm29155-201ENSMUST00000185910 269 ntBASIC13.24□□□□□ -0.29
GabpaQ00422 Gm5100-201ENSMUST00000195631 589 ntBASIC13.24□□□□□ -0.29
GabpaQ00422 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.24□□□□□ -0.29
GabpaQ00422 Gm23680-201ENSMUST00000083162 164 ntBASIC13.24□□□□□ -0.29
GabpaQ00422 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.24□□□□□ -0.29
GabpaQ00422 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
GabpaQ00422 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
GabpaQ00422 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
GabpaQ00422 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
GabpaQ00422 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.24□□□□□ -0.29
GabpaQ00422 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GabpaQ00422 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
GabpaQ00422 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
GabpaQ00422 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
GabpaQ00422 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
GabpaQ00422 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.23□□□□□ -0.29
GabpaQ00422 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.23□□□□□ -0.29
GabpaQ00422 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.23□□□□□ -0.29
GabpaQ00422 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.23□□□□□ -0.29
GabpaQ00422 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.23□□□□□ -0.29
GabpaQ00422 Gm24398-201ENSMUST00000157870 109 ntBASIC13.23□□□□□ -0.29
GabpaQ00422 Gm15744-201ENSMUST00000161734 213 ntBASIC13.23□□□□□ -0.29
GabpaQ00422 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.23□□□□□ -0.29
GabpaQ00422 Gm37826-201ENSMUST00000195329 322 ntBASIC13.23□□□□□ -0.29
GabpaQ00422 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.23□□□□□ -0.29
GabpaQ00422 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.23□□□□□ -0.29
GabpaQ00422 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.23□□□□□ -0.29
GabpaQ00422 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.23□□□□□ -0.29
GabpaQ00422 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.23□□□□□ -0.29
GabpaQ00422 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.23□□□□□ -0.29
GabpaQ00422 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.23□□□□□ -0.29
GabpaQ00422 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GabpaQ00422 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.22□□□□□ -0.29
GabpaQ00422 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
GabpaQ00422 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.22□□□□□ -0.29
GabpaQ00422 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.22□□□□□ -0.29
GabpaQ00422 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
GabpaQ00422 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
GabpaQ00422 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.22□□□□□ -0.29
GabpaQ00422 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GabpaQ00422 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms