Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Cacna1aP97445 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cacna1aP97445 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.83□□□□□ -0.68
Cacna1aP97445 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Cacna1aP97445 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.83□□□□□ -0.68
Cacna1aP97445 Gm12736-201ENSMUST00000119330 236 ntBASIC10.83□□□□□ -0.68
Cacna1aP97445 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.83□□□□□ -0.68
Cacna1aP97445 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Gm34379-201ENSMUST00000195036 290 ntBASIC10.83□□□□□ -0.68
Cacna1aP97445 Gm43852-201ENSMUST00000202098 917 ntBASIC10.83□□□□□ -0.68
Cacna1aP97445 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC10.83□□□□□ -0.68
Cacna1aP97445 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.83□□□□□ -0.68
Cacna1aP97445 Gm7940-201ENSMUST00000218195 769 ntBASIC10.83□□□□□ -0.68
Cacna1aP97445 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Cacna1aP97445 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.83□□□□□ -0.68
Cacna1aP97445 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cacna1aP97445 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC10.82□□□□□ -0.68
Cacna1aP97445 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cacna1aP97445 Gm15374-201ENSMUST00000119313 844 ntBASIC10.82□□□□□ -0.68
Cacna1aP97445 Gm10169-201ENSMUST00000121822 348 ntBASIC10.82□□□□□ -0.68
Cacna1aP97445 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC10.82□□□□□ -0.68
Cacna1aP97445 Gm10807-201ENSMUST00000177134 795 ntBASIC10.82□□□□□ -0.68
Cacna1aP97445 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cacna1aP97445 Gm7069-201ENSMUST00000182418 1008 ntBASIC10.82□□□□□ -0.68
Cacna1aP97445 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Cacna1aP97445 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Cacna1aP97445 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cacna1aP97445 Gm6304-201ENSMUST00000096579 447 ntBASIC10.82□□□□□ -0.68
Cacna1aP97445 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Cacna1aP97445 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cacna1aP97445 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Cacna1aP97445 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.82□□□□□ -0.68
Cacna1aP97445 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Cacna1aP97445 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Gm13171-201ENSMUST00000117233 391 ntBASIC10.82□□□□□ -0.68
Cacna1aP97445 Gm17214-201ENSMUST00000164501 541 ntBASIC10.82□□□□□ -0.68
Cacna1aP97445 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC10.82□□□□□ -0.68
Cacna1aP97445 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.82□□□□□ -0.68
Cacna1aP97445 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC10.82□□□□□ -0.68
Cacna1aP97445 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 AC154759.1-201ENSMUST00000224137 1159 ntBASIC10.82□□□□□ -0.68
Cacna1aP97445 AC130477.1-201ENSMUST00000226982 420 ntBASIC10.82□□□□□ -0.68
Cacna1aP97445 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cacna1aP97445 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Cacna1aP97445 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cacna1aP97445 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Cacna1aP97445 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.82□□□□□ -0.68
Cacna1aP97445 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cacna1aP97445 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Cacna1aP97445 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.81□□□□□ -0.68
Cacna1aP97445 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cacna1aP97445 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.81□□□□□ -0.68
Cacna1aP97445 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cacna1aP97445 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.81□□□□□ -0.68
Cacna1aP97445 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC10.81□□□□□ -0.68
Cacna1aP97445 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cacna1aP97445 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms