Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.06□□□□□ -0.48
Trim43bP86448 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trim43bP86448 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.06□□□□□ -0.48
Trim43bP86448 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.05□□□□□ -0.48
Trim43bP86448 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim43bP86448 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim43bP86448 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim43bP86448 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim43bP86448 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Gm23912-201ENSMUST00000104687 87 ntBASIC12.05□□□□□ -0.48
Trim43bP86448 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim43bP86448 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim43bP86448 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim43bP86448 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.05□□□□□ -0.48
Trim43bP86448 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim43bP86448 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim43bP86448 Rprl1-202ENSMUST00000198476 238 ntBASIC12.05□□□□□ -0.48
Trim43bP86448 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.05□□□□□ -0.48
Trim43bP86448 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim43bP86448 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim43bP86448 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim43bP86448 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.05□□□□□ -0.48
Trim43bP86448 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.05□□□□□ -0.48
Trim43bP86448 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.05□□□□□ -0.48
Trim43bP86448 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.05□□□□□ -0.48
Trim43bP86448 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.05□□□□□ -0.48
Trim43bP86448 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43bP86448 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim43bP86448 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.04□□□□□ -0.48
Trim43bP86448 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.04□□□□□ -0.48
Trim43bP86448 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim43bP86448 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Gm14832-201ENSMUST00000121289 322 ntBASIC12.04□□□□□ -0.48
Trim43bP86448 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Trim43bP86448 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim43bP86448 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim43bP86448 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim43bP86448 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.04□□□□□ -0.48
Trim43bP86448 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim43bP86448 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim43bP86448 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim43bP86448 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim43bP86448 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.04□□□□□ -0.48
Trim43bP86448 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Trim43bP86448 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43bP86448 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.04□□□□□ -0.48
Trim43bP86448 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.04□□□□□ -0.48
Trim43bP86448 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43bP86448 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim43bP86448 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43bP86448 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.03□□□□□ -0.48
Trim43bP86448 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43bP86448 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43bP86448 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43bP86448 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trim43bP86448 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43bP86448 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.03□□□□□ -0.48
Trim43bP86448 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43bP86448 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43bP86448 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim43bP86448 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43bP86448 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms