Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm23949-201ENSMUST00000104027 127 ntBASIC9.77□□□□□ -0.85
Pdlim4P70271 Gm26286-201ENSMUST00000104166 134 ntBASIC9.77□□□□□ -0.85
Pdlim4P70271 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Gm11439-201ENSMUST00000118598 409 ntBASIC9.77□□□□□ -0.85
Pdlim4P70271 Gm14208-201ENSMUST00000119645 678 ntBASIC9.77□□□□□ -0.85
Pdlim4P70271 Gm12997-201ENSMUST00000120207 640 ntBASIC9.77□□□□□ -0.85
Pdlim4P70271 Gm11660-201ENSMUST00000120955 412 ntBASIC9.77□□□□□ -0.85
Pdlim4P70271 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC9.77□□□□□ -0.85
Pdlim4P70271 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
Pdlim4P70271 Gm24990-201ENSMUST00000157406 323 ntBASIC9.77□□□□□ -0.85
Pdlim4P70271 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.77□□□□□ -0.85
Pdlim4P70271 Gm4959-201ENSMUST00000197271 1044 ntBASIC9.77□□□□□ -0.85
Pdlim4P70271 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.77□□□□□ -0.85
Pdlim4P70271 Gm19287-201ENSMUST00000203190 358 ntBASIC9.77□□□□□ -0.85
Pdlim4P70271 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC9.77□□□□□ -0.85
Pdlim4P70271 AC107638.1-201ENSMUST00000213690 1061 ntBASIC9.77□□□□□ -0.85
Pdlim4P70271 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.77□□□□□ -0.85
Pdlim4P70271 Gm26448-201ENSMUST00000082446 203 ntBASIC9.77□□□□□ -0.85
Pdlim4P70271 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Pdlim4P70271 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Pdlim4P70271 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.77□□□□□ -0.85
Pdlim4P70271 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Pdlim4P70271 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
Pdlim4P70271 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.77□□□□□ -0.85
Pdlim4P70271 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Btrc-209ENSMUST00000224478 2194 ntBASIC9.76□□□□□ -0.85
Pdlim4P70271 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Gm14028-201ENSMUST00000117434 479 ntBASIC9.76□□□□□ -0.85
Pdlim4P70271 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9.76□□□□□ -0.85
Pdlim4P70271 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Gm27341-201ENSMUST00000183570 106 ntBASIC9.76□□□□□ -0.85
Pdlim4P70271 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Gm37666-201ENSMUST00000194110 866 ntBASIC9.76□□□□□ -0.85
Pdlim4P70271 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.76□□□□□ -0.85
Pdlim4P70271 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.76□□□□□ -0.85
Pdlim4P70271 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Pdlim4P70271 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pdlim4P70271 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms