Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 Gm9996-201ENSMUST00000070359 913 ntBASIC10.4□□□□□ -0.74
Sf3b6P59708 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Sf3b6P59708 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Sf3b6P59708 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.4□□□□□ -0.74
Sf3b6P59708 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 Gm45251-201ENSMUST00000209486 1465 ntBASIC10.4□□□□□ -0.74
Sf3b6P59708 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Sf3b6P59708 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Sf3b6P59708 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.4□□□□□ -0.75
Sf3b6P59708 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Sf3b6P59708 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Sf3b6P59708 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Sf3b6P59708 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.39□□□□□ -0.75
Sf3b6P59708 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.39□□□□□ -0.75
Sf3b6P59708 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.39□□□□□ -0.75
Sf3b6P59708 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Gm22018-201ENSMUST00000104357 131 ntBASIC10.39□□□□□ -0.75
Sf3b6P59708 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Sf3b6P59708 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.39□□□□□ -0.75
Sf3b6P59708 Gm24548-201ENSMUST00000158650 108 ntBASIC10.39□□□□□ -0.75
Sf3b6P59708 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.39□□□□□ -0.75
Sf3b6P59708 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.39□□□□□ -0.75
Sf3b6P59708 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Gm43133-201ENSMUST00000197472 463 ntBASIC10.39□□□□□ -0.75
Sf3b6P59708 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Gm18054-201ENSMUST00000207539 555 ntBASIC10.39□□□□□ -0.75
Sf3b6P59708 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.39□□□□□ -0.75
Sf3b6P59708 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Sf3b6P59708 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.39□□□□□ -0.75
Sf3b6P59708 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Sf3b6P59708 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.39□□□□□ -0.75
Sf3b6P59708 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b6P59708 Gm14667-201ENSMUST00000119448 1350 ntBASIC10.39□□□□□ -0.75
Sf3b6P59708 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Sf3b6P59708 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.39□□□□□ -0.75
Sf3b6P59708 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.38□□□□□ -0.75
Sf3b6P59708 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b6P59708 Gm10434-201ENSMUST00000101158 471 ntBASIC10.38□□□□□ -0.75
Sf3b6P59708 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Sf3b6P59708 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms