Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Tubgcp3P58854 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Gm38314-201ENSMUST00000195709 625 ntBASIC11.94□□□□□ -0.5
Tubgcp3P58854 Gm45433-201ENSMUST00000209386 247 ntBASIC11.94□□□□□ -0.5
Tubgcp3P58854 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Gm4157-201ENSMUST00000211647 679 ntBASIC11.94□□□□□ -0.5
Tubgcp3P58854 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.94□□□□□ -0.5
Tubgcp3P58854 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.94□□□□□ -0.5
Tubgcp3P58854 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Tubgcp3P58854 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Gm8343-201ENSMUST00000182705 994 ntBASIC11.93□□□□□ -0.5
Tubgcp3P58854 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.93□□□□□ -0.5
Tubgcp3P58854 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Gm2553-201ENSMUST00000215986 605 ntBASIC11.93□□□□□ -0.5
Tubgcp3P58854 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubgcp3P58854 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubgcp3P58854 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tubgcp3P58854 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubgcp3P58854 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tubgcp3P58854 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tubgcp3P58854 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubgcp3P58854 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tubgcp3P58854 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tubgcp3P58854 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Tubgcp3P58854 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tubgcp3P58854 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.92□□□□□ -0.5
Tubgcp3P58854 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubgcp3P58854 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tubgcp3P58854 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tubgcp3P58854 Gm14130-201ENSMUST00000118417 987 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms