Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rrp1P56183 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rrp1P56183 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rrp1P56183 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.16□□□□□ -0.3
Rrp1P56183 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Rrp1P56183 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.16□□□□□ -0.3
Rrp1P56183 Gm5070-201ENSMUST00000177599 862 ntBASIC13.16□□□□□ -0.3
Rrp1P56183 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.16□□□□□ -0.3
Rrp1P56183 Gm3096-201ENSMUST00000185770 364 ntBASIC13.16□□□□□ -0.3
Rrp1P56183 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.16□□□□□ -0.3
Rrp1P56183 Gm43966-201ENSMUST00000203301 612 ntBASIC13.16□□□□□ -0.3
Rrp1P56183 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.16□□□□□ -0.3
Rrp1P56183 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.16□□□□□ -0.3
Rrp1P56183 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.16□□□□□ -0.3
Rrp1P56183 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Rrp1P56183 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Rrp1P56183 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Rrp1P56183 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.16□□□□□ -0.3
Rrp1P56183 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rrp1P56183 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.15□□□□□ -0.3
Rrp1P56183 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Rrp1P56183 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.15□□□□□ -0.3
Rrp1P56183 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Gm23270-201ENSMUST00000104055 131 ntBASIC13.15□□□□□ -0.3
Rrp1P56183 Gm2991-201ENSMUST00000173338 480 ntBASIC13.15□□□□□ -0.3
Rrp1P56183 Mir8109-201ENSMUST00000184375 117 ntBASIC13.15□□□□□ -0.3
Rrp1P56183 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.15□□□□□ -0.3
Rrp1P56183 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.15□□□□□ -0.3
Rrp1P56183 Gm45598-202ENSMUST00000210719 986 ntBASIC13.15□□□□□ -0.3
Rrp1P56183 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.15□□□□□ -0.3
Rrp1P56183 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.15□□□□□ -0.3
Rrp1P56183 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rrp1P56183 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rrp1P56183 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.15□□□□□ -0.3
Rrp1P56183 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC13.15□□□□□ -0.3
Rrp1P56183 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rrp1P56183 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.15□□□□□ -0.3
Rrp1P56183 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC13.15□□□□□ -0.3
Rrp1P56183 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rrp1P56183 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Rrp1P56183 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rrp1P56183 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rrp1P56183 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Rrp1P56183 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rrp1P56183 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rrp1P56183 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Rrp1P56183 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Rrp1P56183 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rrp1P56183 Gm29245-201ENSMUST00000187332 1416 ntBASIC13.14□□□□□ -0.31
Rrp1P56183 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rrp1P56183 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rrp1P56183 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rrp1P56183 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Rrp1P56183 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rrp1P56183 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Rrp1P56183 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rrp1P56183 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Rrp1P56183 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rrp1P56183 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.14□□□□□ -0.31
Rrp1P56183 Gm26286-201ENSMUST00000104166 134 ntBASIC13.14□□□□□ -0.31
Rrp1P56183 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.14□□□□□ -0.31
Rrp1P56183 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.14□□□□□ -0.31
Rrp1P56183 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Rrp1P56183 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Rrp1P56183 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms