Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sox1P53783 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Gm7701-201ENSMUST00000163185 1479 ntBASIC11.97□□□□□ -0.49
Sox1P53783 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sox1P53783 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sox1P53783 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox1P53783 Gm12345-201ENSMUST00000119288 898 ntBASIC11.97□□□□□ -0.49
Sox1P53783 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC11.97□□□□□ -0.49
Sox1P53783 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC11.97□□□□□ -0.49
Sox1P53783 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox1P53783 Cd9-ps-201ENSMUST00000174687 650 ntBASIC11.97□□□□□ -0.49
Sox1P53783 Gm27826-201ENSMUST00000175282 255 ntBASIC11.97□□□□□ -0.49
Sox1P53783 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.97□□□□□ -0.49
Sox1P53783 Gm27675-201ENSMUST00000184527 94 ntBASIC11.97□□□□□ -0.49
Sox1P53783 Kif4-ps-202ENSMUST00000185083 652 ntBASIC11.97□□□□□ -0.49
Sox1P53783 Gm38103-201ENSMUST00000191707 864 ntBASIC11.97□□□□□ -0.49
Sox1P53783 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Sox1P53783 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.97□□□□□ -0.49
Sox1P53783 Gm4903-201ENSMUST00000210462 405 ntBASIC11.97□□□□□ -0.49
Sox1P53783 Gm7940-201ENSMUST00000218195 769 ntBASIC11.97□□□□□ -0.49
Sox1P53783 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox1P53783 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.97□□□□□ -0.49
Sox1P53783 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sox1P53783 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sox1P53783 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sox1P53783 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Sox1P53783 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox1P53783 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox1P53783 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox1P53783 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox1P53783 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox1P53783 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox1P53783 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Sox1P53783 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox1P53783 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Sox1P53783 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Sox1P53783 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox1P53783 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox1P53783 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
Sox1P53783 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox1P53783 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox1P53783 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox1P53783 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox1P53783 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox1P53783 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox1P53783 Gm6158-201ENSMUST00000109467 904 ntBASIC11.96□□□□□ -0.49
Sox1P53783 Gm11540-201ENSMUST00000117457 780 ntBASIC11.96□□□□□ -0.49
Sox1P53783 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox1P53783 Gm7741-201ENSMUST00000181445 989 ntBASIC11.96□□□□□ -0.49
Sox1P53783 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.96□□□□□ -0.49
Sox1P53783 Gm43811-201ENSMUST00000202862 695 ntBASIC11.96□□□□□ -0.49
Sox1P53783 Gm17825-201ENSMUST00000206836 794 ntBASIC11.96□□□□□ -0.49
Sox1P53783 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Sox1P53783 Gm18041-201ENSMUST00000218210 618 ntBASIC11.96□□□□□ -0.49
Sox1P53783 Gm6478-201ENSMUST00000099450 742 ntBASIC11.96□□□□□ -0.49
Sox1P53783 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sox1P53783 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Sox1P53783 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Sox1P53783 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
Sox1P53783 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox1P53783 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox1P53783 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.96□□□□□ -0.5
Sox1P53783 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sox1P53783 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sox1P53783 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.95□□□□□ -0.5
Sox1P53783 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms