Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.4□□□□□ -0.9
Cd27P41272 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.4□□□□□ -0.9
Cd27P41272 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.4□□□□□ -0.9
Cd27P41272 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.4□□□□□ -0.9
Cd27P41272 Gm23251-201ENSMUST00000103773 110 ntBASIC9.4□□□□□ -0.9
Cd27P41272 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Cd27P41272 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC9.4□□□□□ -0.9
Cd27P41272 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC9.4□□□□□ -0.9
Cd27P41272 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Gm37246-201ENSMUST00000192665 835 ntBASIC9.4□□□□□ -0.9
Cd27P41272 Gm38151-201ENSMUST00000195085 289 ntBASIC9.4□□□□□ -0.9
Cd27P41272 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.4□□□□□ -0.9
Cd27P41272 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.4□□□□□ -0.9
Cd27P41272 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Cd27P41272 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.4□□□□□ -0.9
Cd27P41272 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.4□□□□□ -0.9
Cd27P41272 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Cd27P41272 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cd27P41272 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cd27P41272 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cd27P41272 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cd27P41272 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cd27P41272 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.4□□□□□ -0.91
Cd27P41272 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cd27P41272 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cd27P41272 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cd27P41272 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cd27P41272 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Cd27P41272 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.4□□□□□ -0.91
Cd27P41272 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.4□□□□□ -0.91
Cd27P41272 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Cd27P41272 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9.39□□□□□ -0.91
Cd27P41272 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Cd27P41272 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Gm18262-201ENSMUST00000222560 1946 ntBASIC9.39□□□□□ -0.91
Cd27P41272 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Cd27P41272 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Cd27P41272 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Cd27P41272 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Cd27P41272 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.39□□□□□ -0.91
Cd27P41272 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.39□□□□□ -0.91
Cd27P41272 Gm11783-201ENSMUST00000119549 885 ntBASIC9.39□□□□□ -0.91
Cd27P41272 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC9.39□□□□□ -0.91
Cd27P41272 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.39□□□□□ -0.91
Cd27P41272 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Gm8459-201ENSMUST00000162504 760 ntBASIC9.39□□□□□ -0.91
Cd27P41272 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Cd27P41272 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Cd27P41272 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.39□□□□□ -0.91
Cd27P41272 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC9.39□□□□□ -0.91
Cd27P41272 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.39□□□□□ -0.91
Cd27P41272 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.39□□□□□ -0.91
Cd27P41272 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Cd27P41272 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.39□□□□□ -0.91
Cd27P41272 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Cd27P41272 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd27P41272 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms