Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Sox6P40645 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Sox6P40645 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11□□□□□ -0.65
Sox6P40645 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sox6P40645 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11□□□□□ -0.65
Sox6P40645 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11□□□□□ -0.65
Sox6P40645 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Gm42427-201ENSMUST00000200473 5292 ntBASIC11□□□□□ -0.65
Sox6P40645 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11□□□□□ -0.65
Sox6P40645 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11□□□□□ -0.65
Sox6P40645 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sox6P40645 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sox6P40645 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox6P40645 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Sox6P40645 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sox6P40645 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.99□□□□□ -0.65
Sox6P40645 Gm13350-201ENSMUST00000120519 479 ntBASIC10.99□□□□□ -0.65
Sox6P40645 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Sox6P40645 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.99□□□□□ -0.65
Sox6P40645 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Gm8712-201ENSMUST00000221090 701 ntBASIC10.99□□□□□ -0.65
Sox6P40645 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.99□□□□□ -0.65
Sox6P40645 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.99□□□□□ -0.65
Sox6P40645 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Sox6P40645 Gm9996-201ENSMUST00000070359 913 ntBASIC10.99□□□□□ -0.65
Sox6P40645 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.99□□□□□ -0.65
Sox6P40645 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.99□□□□□ -0.65
Sox6P40645 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.99□□□□□ -0.65
Sox6P40645 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.99□□□□□ -0.65
Sox6P40645 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.99□□□□□ -0.65
Sox6P40645 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox6P40645 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.99□□□□□ -0.65
Sox6P40645 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.99□□□□□ -0.65
Sox6P40645 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.98□□□□□ -0.65
Sox6P40645 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox6P40645 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sox6P40645 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sox6P40645 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox6P40645 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Gm24830-201ENSMUST00000102024 166 ntBASIC10.98□□□□□ -0.65
Sox6P40645 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.98□□□□□ -0.65
Sox6P40645 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.98□□□□□ -0.65
Sox6P40645 Gm14109-201ENSMUST00000118814 309 ntBASIC10.98□□□□□ -0.65
Sox6P40645 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.98□□□□□ -0.65
Sox6P40645 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox6P40645 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Gm7584-201ENSMUST00000175829 940 ntBASIC10.98□□□□□ -0.65
Sox6P40645 Gm4034-201ENSMUST00000187674 480 ntBASIC10.98□□□□□ -0.65
Sox6P40645 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.98□□□□□ -0.65
Sox6P40645 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.98□□□□□ -0.65
Sox6P40645 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Sox6P40645 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.98□□□□□ -0.65
Sox6P40645 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.98□□□□□ -0.65
Sox6P40645 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sox6P40645 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox6P40645 Gm26232-201ENSMUST00000083360 166 ntBASIC10.98□□□□□ -0.65
Sox6P40645 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.98□□□□□ -0.65
Sox6P40645 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms