Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd1P40201 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd1P40201 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Chd1P40201 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd1P40201 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Chd1P40201 Gm13456-201ENSMUST00000118928 1365 ntBASIC17.14■□□□□ 0.33
Chd1P40201 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC17.14■□□□□ 0.33
Chd1P40201 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd1P40201 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd1P40201 Gm24161-201ENSMUST00000104592 130 ntBASIC17.14■□□□□ 0.33
Chd1P40201 Gm6276-201ENSMUST00000120159 579 ntBASIC17.14■□□□□ 0.33
Chd1P40201 Gm6517-201ENSMUST00000121056 511 ntBASIC17.14■□□□□ 0.33
Chd1P40201 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chd1P40201 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC17.14■□□□□ 0.33
Chd1P40201 Gm6946-201ENSMUST00000182237 987 ntBASIC17.14■□□□□ 0.33
Chd1P40201 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC17.14■□□□□ 0.33
Chd1P40201 Gm5507-201ENSMUST00000091897 1008 ntBASIC17.14■□□□□ 0.33
Chd1P40201 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd1P40201 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd1P40201 Gm5739-201ENSMUST00000208601 1703 ntBASIC17.14■□□□□ 0.33
Chd1P40201 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd1P40201 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chd1P40201 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd1P40201 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd1P40201 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Gm7781-201ENSMUST00000117258 788 ntBASIC17.13■□□□□ 0.33
Chd1P40201 Gm26379-201ENSMUST00000178125 138 ntBASIC17.13■□□□□ 0.33
Chd1P40201 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Chd1P40201 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC17.13■□□□□ 0.33
Chd1P40201 Gm44908-201ENSMUST00000208610 266 ntBASIC17.13■□□□□ 0.33
Chd1P40201 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Chd1P40201 Gm3791-201ENSMUST00000220790 768 ntBASIC17.13■□□□□ 0.33
Chd1P40201 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Chd1P40201 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Chd1P40201 Klf10-203ENSMUST00000227920 2144 ntBASIC17.13■□□□□ 0.33
Chd1P40201 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Gm19692-201ENSMUST00000203856 2084 ntBASIC17.13■□□□□ 0.33
Chd1P40201 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Chd1P40201 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC17.13■□□□□ 0.33
Chd1P40201 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.13■□□□□ 0.33
Chd1P40201 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Gm12716-201ENSMUST00000120606 1354 ntBASIC17.13■□□□□ 0.33
Chd1P40201 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Gm7405-201ENSMUST00000121476 1337 ntBASIC17.13■□□□□ 0.33
Chd1P40201 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC17.13■□□□□ 0.33
Chd1P40201 Gm14699-201ENSMUST00000122340 228 ntBASIC17.13■□□□□ 0.33
Chd1P40201 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Gm13857-201ENSMUST00000139645 173 ntBASIC17.13■□□□□ 0.33
Chd1P40201 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd1P40201 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Chd1P40201 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC17.13■□□□□ 0.33
Chd1P40201 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Chd1P40201 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1P40201 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1P40201 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1P40201 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1P40201 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC17.12■□□□□ 0.33
Chd1P40201 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1P40201 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1P40201 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC17.12■□□□□ 0.33
Chd1P40201 Ighv5-1-201ENSMUST00000193324 353 ntBASIC17.12■□□□□ 0.33
Chd1P40201 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC17.12■□□□□ 0.33
Chd1P40201 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1P40201 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chd1P40201 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1P40201 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC17.12■□□□□ 0.33
Chd1P40201 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chd1P40201 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chd1P40201 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chd1P40201 AC108858.2-201ENSMUST00000228186 1425 ntBASIC17.12■□□□□ 0.33
Chd1P40201 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1P40201 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC17.11■□□□□ 0.33
Chd1P40201 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1P40201 Gm7642-201ENSMUST00000216345 1809 ntBASIC17.11■□□□□ 0.33
Chd1P40201 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1P40201 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC17.11■□□□□ 0.33
Chd1P40201 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1P40201 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC17.11■□□□□ 0.33
Chd1P40201 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1P40201 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Chd1P40201 Gm38246-201ENSMUST00000194318 1511 ntBASIC17.11■□□□□ 0.33
Chd1P40201 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Chd1P40201 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Chd1P40201 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1P40201 Gm8557-201ENSMUST00000220777 475 ntBASIC17.11■□□□□ 0.33
Chd1P40201 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1P40201 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Chd1P40201 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms