Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC9.64□□□□□ -0.87
Timp3P39876 Gm22334-201ENSMUST00000158070 133 ntBASIC9.64□□□□□ -0.87
Timp3P39876 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Timp3P39876 Gm3332-201ENSMUST00000189337 928 ntBASIC9.64□□□□□ -0.87
Timp3P39876 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.64□□□□□ -0.87
Timp3P39876 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.64□□□□□ -0.87
Timp3P39876 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Timp3P39876 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Timp3P39876 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.64□□□□□ -0.87
Timp3P39876 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.64□□□□□ -0.87
Timp3P39876 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
Timp3P39876 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.63□□□□□ -0.87
Timp3P39876 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Timp3P39876 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Timp3P39876 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Timp3P39876 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.63□□□□□ -0.87
Timp3P39876 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.63□□□□□ -0.87
Timp3P39876 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Timp3P39876 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.63□□□□□ -0.87
Timp3P39876 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 AC126262.1-201ENSMUST00000221802 1904 ntBASIC9.63□□□□□ -0.87
Timp3P39876 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Timp3P39876 Gm12857-201ENSMUST00000117678 592 ntBASIC9.63□□□□□ -0.87
Timp3P39876 Gm15515-201ENSMUST00000117827 822 ntBASIC9.63□□□□□ -0.87
Timp3P39876 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.63□□□□□ -0.87
Timp3P39876 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.63□□□□□ -0.87
Timp3P39876 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC9.63□□□□□ -0.87
Timp3P39876 Gm5523-201ENSMUST00000180415 997 ntBASIC9.63□□□□□ -0.87
Timp3P39876 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Gm8100-201ENSMUST00000182906 988 ntBASIC9.63□□□□□ -0.87
Timp3P39876 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC9.63□□□□□ -0.87
Timp3P39876 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.63□□□□□ -0.87
Timp3P39876 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Timp3P39876 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.63□□□□□ -0.87
Timp3P39876 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Gm4607-201ENSMUST00000206649 577 ntBASIC9.63□□□□□ -0.87
Timp3P39876 Gm10109-202ENSMUST00000206890 1211 ntBASIC9.63□□□□□ -0.87
Timp3P39876 Gm5369-201ENSMUST00000217499 588 ntBASIC9.63□□□□□ -0.87
Timp3P39876 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC9.63□□□□□ -0.87
Timp3P39876 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Timp3P39876 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Timp3P39876 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Timp3P39876 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.62□□□□□ -0.87
Timp3P39876 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Timp3P39876 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Timp3P39876 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.62□□□□□ -0.87
Timp3P39876 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.62□□□□□ -0.87
Timp3P39876 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms