Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sftpa1P35242 Cog3-203ENSMUST00000227473 4197 ntBASIC10.81□□□□□ -0.68
Sftpa1P35242 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sftpa1P35242 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sftpa1P35242 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC10.81□□□□□ -0.68
Sftpa1P35242 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.81□□□□□ -0.68
Sftpa1P35242 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sftpa1P35242 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC10.81□□□□□ -0.68
Sftpa1P35242 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.81□□□□□ -0.68
Sftpa1P35242 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.81□□□□□ -0.68
Sftpa1P35242 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sftpa1P35242 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Sftpa1P35242 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.81□□□□□ -0.68
Sftpa1P35242 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sftpa1P35242 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sftpa1P35242 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.8□□□□□ -0.68
Sftpa1P35242 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sftpa1P35242 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.8□□□□□ -0.68
Sftpa1P35242 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Sftpa1P35242 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.8□□□□□ -0.68
Sftpa1P35242 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.8□□□□□ -0.68
Sftpa1P35242 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Sftpa1P35242 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.8□□□□□ -0.68
Sftpa1P35242 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC10.8□□□□□ -0.68
Sftpa1P35242 Gm7741-201ENSMUST00000181445 989 ntBASIC10.8□□□□□ -0.68
Sftpa1P35242 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.8□□□□□ -0.68
Sftpa1P35242 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Sftpa1P35242 Gm17825-201ENSMUST00000206836 794 ntBASIC10.8□□□□□ -0.68
Sftpa1P35242 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Sftpa1P35242 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.8□□□□□ -0.68
Sftpa1P35242 AC130477.1-201ENSMUST00000226982 420 ntBASIC10.8□□□□□ -0.68
Sftpa1P35242 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.8□□□□□ -0.68
Sftpa1P35242 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Sftpa1P35242 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Sftpa1P35242 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Map1b-203ENSMUST00000223725 2669 ntBASIC10.8□□□□□ -0.68
Sftpa1P35242 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sftpa1P35242 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.8□□□□□ -0.68
Sftpa1P35242 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.79□□□□□ -0.68
Sftpa1P35242 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.79□□□□□ -0.68
Sftpa1P35242 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sftpa1P35242 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.79□□□□□ -0.68
Sftpa1P35242 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC10.79□□□□□ -0.68
Sftpa1P35242 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sftpa1P35242 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC10.79□□□□□ -0.68
Sftpa1P35242 Gm8451-201ENSMUST00000170338 447 ntBASIC10.79□□□□□ -0.68
Sftpa1P35242 Gm10807-201ENSMUST00000177134 795 ntBASIC10.79□□□□□ -0.68
Sftpa1P35242 Gm9081-201ENSMUST00000182346 991 ntBASIC10.79□□□□□ -0.68
Sftpa1P35242 Gm9192-201ENSMUST00000183221 985 ntBASIC10.79□□□□□ -0.68
Sftpa1P35242 Mir6941-201ENSMUST00000184711 59 ntBASIC10.79□□□□□ -0.68
Sftpa1P35242 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.79□□□□□ -0.68
Sftpa1P35242 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Gm44953-201ENSMUST00000208745 1286 ntBASIC10.79□□□□□ -0.68
Sftpa1P35242 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms