Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxc5P32043 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.84□□□□□ -0.67
Hoxc5P32043 Gm24255-201ENSMUST00000104481 128 ntBASIC10.84□□□□□ -0.67
Hoxc5P32043 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxc5P32043 Gm14723-201ENSMUST00000118686 215 ntBASIC10.84□□□□□ -0.67
Hoxc5P32043 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.84□□□□□ -0.67
Hoxc5P32043 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.84□□□□□ -0.67
Hoxc5P32043 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.84□□□□□ -0.67
Hoxc5P32043 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.84□□□□□ -0.67
Hoxc5P32043 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.84□□□□□ -0.67
Hoxc5P32043 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Hoxc5P32043 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.84□□□□□ -0.67
Hoxc5P32043 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Hoxc5P32043 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Hoxc5P32043 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Hoxc5P32043 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxc5P32043 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Hoxc5P32043 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc5P32043 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxc5P32043 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.83□□□□□ -0.67
Hoxc5P32043 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Hoxc5P32043 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.83□□□□□ -0.68
Hoxc5P32043 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hoxc5P32043 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hoxc5P32043 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Hoxc5P32043 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hoxc5P32043 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.83□□□□□ -0.68
Hoxc5P32043 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hoxc5P32043 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hoxc5P32043 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.83□□□□□ -0.68
Hoxc5P32043 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Hoxc5P32043 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.83□□□□□ -0.68
Hoxc5P32043 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.83□□□□□ -0.68
Hoxc5P32043 Gm11700-201ENSMUST00000119409 403 ntBASIC10.83□□□□□ -0.68
Hoxc5P32043 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hoxc5P32043 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Hoxc5P32043 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Gm25700-201ENSMUST00000177693 110 ntBASIC10.83□□□□□ -0.68
Hoxc5P32043 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.83□□□□□ -0.68
Hoxc5P32043 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.83□□□□□ -0.68
Hoxc5P32043 Rprl1-202ENSMUST00000198476 238 ntBASIC10.83□□□□□ -0.68
Hoxc5P32043 Gm43822-201ENSMUST00000200285 476 ntBASIC10.83□□□□□ -0.68
Hoxc5P32043 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Gm44651-201ENSMUST00000207343 372 ntBASIC10.83□□□□□ -0.68
Hoxc5P32043 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.83□□□□□ -0.68
Hoxc5P32043 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Hoxc5P32043 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.83□□□□□ -0.68
Hoxc5P32043 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms