Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
BdnfP21237 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.25□□□□□ -0.61
BdnfP21237 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.25□□□□□ -0.61
BdnfP21237 Gm43002-201ENSMUST00000200310 155 ntBASIC11.25□□□□□ -0.61
BdnfP21237 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.25□□□□□ -0.61
BdnfP21237 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.25□□□□□ -0.61
BdnfP21237 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.25□□□□□ -0.61
BdnfP21237 Gm18935-201ENSMUST00000212692 664 ntBASIC11.25□□□□□ -0.61
BdnfP21237 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
BdnfP21237 Gm19994-201ENSMUST00000217086 586 ntBASIC11.25□□□□□ -0.61
BdnfP21237 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.25□□□□□ -0.61
BdnfP21237 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
BdnfP21237 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.25□□□□□ -0.61
BdnfP21237 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.25□□□□□ -0.61
BdnfP21237 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
BdnfP21237 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.25□□□□□ -0.61
BdnfP21237 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
BdnfP21237 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.25□□□□□ -0.61
BdnfP21237 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
BdnfP21237 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
BdnfP21237 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
BdnfP21237 Gm43817-201ENSMUST00000196459 2262 ntBASIC11.24□□□□□ -0.61
BdnfP21237 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Gm11298-201ENSMUST00000120503 1799 ntBASIC11.24□□□□□ -0.61
BdnfP21237 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.24□□□□□ -0.61
BdnfP21237 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Gm13392-201ENSMUST00000117708 150 ntBASIC11.24□□□□□ -0.61
BdnfP21237 Gm7722-201ENSMUST00000120646 741 ntBASIC11.24□□□□□ -0.61
BdnfP21237 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
BdnfP21237 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
BdnfP21237 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
BdnfP21237 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.24□□□□□ -0.61
BdnfP21237 Gm26956-201ENSMUST00000182176 986 ntBASIC11.24□□□□□ -0.61
BdnfP21237 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.24□□□□□ -0.61
BdnfP21237 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.24□□□□□ -0.61
BdnfP21237 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Gm6013-201ENSMUST00000212264 699 ntBASIC11.24□□□□□ -0.61
BdnfP21237 Gm30285-201ENSMUST00000214614 422 ntBASIC11.24□□□□□ -0.61
BdnfP21237 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.24□□□□□ -0.61
BdnfP21237 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.24□□□□□ -0.61
BdnfP21237 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.24□□□□□ -0.61
BdnfP21237 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
BdnfP21237 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
BdnfP21237 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.24□□□□□ -0.61
BdnfP21237 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
BdnfP21237 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.24□□□□□ -0.61
BdnfP21237 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
BdnfP21237 Gm21115-201ENSMUST00000187565 2578 ntBASIC11.23□□□□□ -0.61
BdnfP21237 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.23□□□□□ -0.61
BdnfP21237 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
BdnfP21237 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.23□□□□□ -0.61
BdnfP21237 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms