Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.82□□□□□ -0.52
VimP20152 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Gm5706-201ENSMUST00000181525 993 ntBASIC11.82□□□□□ -0.52
VimP20152 Gm27702-201ENSMUST00000184512 56 ntBASIC11.82□□□□□ -0.52
VimP20152 Gm28631-201ENSMUST00000190740 334 ntBASIC11.82□□□□□ -0.52
VimP20152 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.82□□□□□ -0.52
VimP20152 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.82□□□□□ -0.52
VimP20152 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.82□□□□□ -0.52
VimP20152 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.82□□□□□ -0.52
VimP20152 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.82□□□□□ -0.52
VimP20152 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
VimP20152 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
VimP20152 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
VimP20152 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.82□□□□□ -0.52
VimP20152 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
VimP20152 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VimP20152 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VimP20152 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
VimP20152 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VimP20152 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.81□□□□□ -0.52
VimP20152 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VimP20152 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VimP20152 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.81□□□□□ -0.52
VimP20152 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VimP20152 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.81□□□□□ -0.52
VimP20152 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.81□□□□□ -0.52
VimP20152 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.81□□□□□ -0.52
VimP20152 Lect2-202ENSMUST00000225183 823 ntBASIC11.81□□□□□ -0.52
VimP20152 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.81□□□□□ -0.52
VimP20152 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.81□□□□□ -0.52
VimP20152 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VimP20152 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VimP20152 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
VimP20152 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VimP20152 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
VimP20152 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VimP20152 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VimP20152 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
VimP20152 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
VimP20152 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.81□□□□□ -0.52
VimP20152 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VimP20152 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VimP20152 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VimP20152 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VimP20152 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.8□□□□□ -0.52
VimP20152 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
VimP20152 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
VimP20152 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
VimP20152 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.8□□□□□ -0.52
VimP20152 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
VimP20152 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
VimP20152 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.8□□□□□ -0.52
VimP20152 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.8□□□□□ -0.52
VimP20152 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Gm44405-201ENSMUST00000198952 126 ntBASIC11.8□□□□□ -0.52
VimP20152 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.8□□□□□ -0.52
VimP20152 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.8□□□□□ -0.52
VimP20152 Gm6218-201ENSMUST00000219812 628 ntBASIC11.8□□□□□ -0.52
VimP20152 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.8□□□□□ -0.52
VimP20152 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Gm22058-201ENSMUST00000083393 310 ntBASIC11.8□□□□□ -0.52
VimP20152 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.8□□□□□ -0.52
VimP20152 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
VimP20152 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC11.8□□□□□ -0.52
VimP20152 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VimP20152 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms