Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Gm43858-201ENSMUST00000199418 1778 ntBASIC9.49□□□□□ -0.89
Cdx1P18111 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.49□□□□□ -0.89
Cdx1P18111 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.49□□□□□ -0.89
Cdx1P18111 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC9.49□□□□□ -0.89
Cdx1P18111 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Cdx1P18111 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC9.49□□□□□ -0.89
Cdx1P18111 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdx1P18111 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Cdx1P18111 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.48□□□□□ -0.89
Cdx1P18111 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Cdx1P18111 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.48□□□□□ -0.89
Cdx1P18111 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Cdx1P18111 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Mir877-201ENSMUST00000104738 85 ntBASIC9.48□□□□□ -0.89
Cdx1P18111 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.48□□□□□ -0.89
Cdx1P18111 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.48□□□□□ -0.89
Cdx1P18111 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC9.48□□□□□ -0.89
Cdx1P18111 Gm8805-201ENSMUST00000117848 313 ntBASIC9.48□□□□□ -0.89
Cdx1P18111 Gm6023-201ENSMUST00000118217 606 ntBASIC9.48□□□□□ -0.89
Cdx1P18111 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC9.48□□□□□ -0.89
Cdx1P18111 Gm26083-201ENSMUST00000157904 193 ntBASIC9.48□□□□□ -0.89
Cdx1P18111 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Gm27320-201ENSMUST00000184892 109 ntBASIC9.48□□□□□ -0.89
Cdx1P18111 Gm37489-201ENSMUST00000191883 159 ntBASIC9.48□□□□□ -0.89
Cdx1P18111 Gm38000-201ENSMUST00000192390 1215 ntBASIC9.48□□□□□ -0.89
Cdx1P18111 Gm4768-201ENSMUST00000206199 686 ntBASIC9.48□□□□□ -0.89
Cdx1P18111 Gm10608-202ENSMUST00000213924 676 ntBASIC9.48□□□□□ -0.89
Cdx1P18111 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.48□□□□□ -0.89
Cdx1P18111 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC9.48□□□□□ -0.89
Cdx1P18111 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.48□□□□□ -0.89
Cdx1P18111 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Cdx1P18111 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Cdx1P18111 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Cdx1P18111 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.48□□□□□ -0.89
Cdx1P18111 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.48□□□□□ -0.89
Cdx1P18111 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Cdx1P18111 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Cdx1P18111 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Cdx1P18111 Gm6714-201ENSMUST00000218677 2330 ntBASIC9.48□□□□□ -0.89
Cdx1P18111 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Cdx1P18111 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdx1P18111 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Cdx1P18111 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cdx1P18111 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cdx1P18111 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cdx1P18111 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Cdx1P18111 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms