Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
UbbP0CG49 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
UbbP0CG49 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
UbbP0CG49 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
UbbP0CG49 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
UbbP0CG49 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
UbbP0CG49 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UbbP0CG49 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
UbbP0CG49 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UbbP0CG49 Gm24845-201ENSMUST00000158034 109 ntBASIC10.17□□□□□ -0.78
UbbP0CG49 Gm17150-201ENSMUST00000165577 381 ntBASIC10.17□□□□□ -0.78
UbbP0CG49 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UbbP0CG49 Gm45784-201ENSMUST00000188360 142 ntBASIC10.17□□□□□ -0.78
UbbP0CG49 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.17□□□□□ -0.78
UbbP0CG49 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UbbP0CG49 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.17□□□□□ -0.78
UbbP0CG49 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.17□□□□□ -0.78
UbbP0CG49 Gm807-202ENSMUST00000224929 408 ntBASIC10.17□□□□□ -0.78
UbbP0CG49 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.17□□□□□ -0.78
UbbP0CG49 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
UbbP0CG49 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
UbbP0CG49 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
UbbP0CG49 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UbbP0CG49 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UbbP0CG49 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.17□□□□□ -0.78
UbbP0CG49 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
UbbP0CG49 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
UbbP0CG49 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.17□□□□□ -0.78
UbbP0CG49 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UbbP0CG49 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UbbP0CG49 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.17□□□□□ -0.78
UbbP0CG49 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.17□□□□□ -0.78
UbbP0CG49 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UbbP0CG49 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UbbP0CG49 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UbbP0CG49 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
UbbP0CG49 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.16□□□□□ -0.78
UbbP0CG49 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
UbbP0CG49 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
UbbP0CG49 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.16□□□□□ -0.78
UbbP0CG49 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.16□□□□□ -0.78
UbbP0CG49 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.16□□□□□ -0.78
UbbP0CG49 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.16□□□□□ -0.78
UbbP0CG49 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.16□□□□□ -0.78
UbbP0CG49 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.16□□□□□ -0.78
UbbP0CG49 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.16□□□□□ -0.78
UbbP0CG49 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.16□□□□□ -0.78
UbbP0CG49 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.16□□□□□ -0.78
UbbP0CG49 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.16□□□□□ -0.78
UbbP0CG49 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.16□□□□□ -0.78
UbbP0CG49 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.16□□□□□ -0.78
UbbP0CG49 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.16□□□□□ -0.78
UbbP0CG49 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.16□□□□□ -0.78
UbbP0CG49 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.16□□□□□ -0.78
UbbP0CG49 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
UbbP0CG49 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
UbbP0CG49 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.16□□□□□ -0.78
UbbP0CG49 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.16□□□□□ -0.78
UbbP0CG49 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
UbbP0CG49 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.16□□□□□ -0.78
UbbP0CG49 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UbbP0CG49 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
UbbP0CG49 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
UbbP0CG49 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
UbbP0CG49 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
UbbP0CG49 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
UbbP0CG49 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.15□□□□□ -0.78
UbbP0CG49 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
UbbP0CG49 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
UbbP0CG49 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
UbbP0CG49 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms