Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC15.06■□□□□ 0
Hoxc9P09633 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hoxc9P09633 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hoxc9P09633 Gm9369-201ENSMUST00000196009 733 ntBASIC15.06■□□□□ 0
Hoxc9P09633 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC15.06■□□□□ 0
Hoxc9P09633 Gm45856-201ENSMUST00000212752 416 ntBASIC15.06■□□□□ 0
Hoxc9P09633 Gm6390-201ENSMUST00000215034 589 ntBASIC15.06■□□□□ 0
Hoxc9P09633 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC15.06■□□□□ 0
Hoxc9P09633 CT573086.4-201ENSMUST00000226729 342 ntBASIC15.06■□□□□ 0
Hoxc9P09633 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC15.06■□□□□ 0
Hoxc9P09633 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC15.06■□□□□ 0
Hoxc9P09633 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc9P09633 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hoxc9P09633 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.06■□□□□ 0
Hoxc9P09633 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC15.06■□□□□ 0
Hoxc9P09633 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC15.06■□□□□ 0
Hoxc9P09633 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc9P09633 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Hoxc9P09633 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Hoxc9P09633 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.06■□□□□ 0
Hoxc9P09633 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Hoxc9P09633 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc9P09633 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hoxc9P09633 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc9P09633 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Hoxc9P09633 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC15.05■□□□□ 0
Hoxc9P09633 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hoxc9P09633 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hoxc9P09633 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hoxc9P09633 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hoxc9P09633 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc9P09633 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hoxc9P09633 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc9P09633 Gm24791-201ENSMUST00000104284 131 ntBASIC15.05■□□□□ -0
Hoxc9P09633 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
Hoxc9P09633 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC15.05■□□□□ -0
Hoxc9P09633 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Hoxc9P09633 Gm14213-201ENSMUST00000119778 768 ntBASIC15.05■□□□□ -0
Hoxc9P09633 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hoxc9P09633 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC15.05■□□□□ -0
Hoxc9P09633 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc9P09633 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC15.05■□□□□ -0
Hoxc9P09633 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC15.05■□□□□ -0
Hoxc9P09633 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC15.05■□□□□ -0
Hoxc9P09633 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hoxc9P09633 Gm7719-201ENSMUST00000182374 975 ntBASIC15.05■□□□□ -0
Hoxc9P09633 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc9P09633 Gm45500-201ENSMUST00000211676 803 ntBASIC15.05■□□□□ -0
Hoxc9P09633 AC122891.1-201ENSMUST00000218671 268 ntBASIC15.05■□□□□ -0
Hoxc9P09633 AC154361.2-201ENSMUST00000224747 943 ntBASIC15.05■□□□□ -0
Hoxc9P09633 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC15.05■□□□□ -0
Hoxc9P09633 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC15.05■□□□□ -0
Hoxc9P09633 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC15.05■□□□□ -0
Hoxc9P09633 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Hoxc9P09633 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Hoxc9P09633 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc9P09633 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hoxc9P09633 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc9P09633 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Hoxc9P09633 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc9P09633 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc9P09633 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Hoxc9P09633 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC15.05■□□□□ -0
Hoxc9P09633 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc9P09633 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc9P09633 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Hoxc9P09633 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc9P09633 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hoxc9P09633 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Hoxc9P09633 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Hoxc9P09633 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hoxc9P09633 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hoxc9P09633 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Hoxc9P09633 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC15.04■□□□□ -0
Hoxc9P09633 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC15.04■□□□□ -0
Hoxc9P09633 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hoxc9P09633 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC15.04■□□□□ -0
Hoxc9P09633 Gm5171-201ENSMUST00000214944 1415 ntBASIC15.04■□□□□ -0
Hoxc9P09633 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Hoxc9P09633 Gm15003-201ENSMUST00000118884 446 ntBASIC15.04■□□□□ -0
Hoxc9P09633 Gm8302-201ENSMUST00000119217 852 ntBASIC15.04■□□□□ -0
Hoxc9P09633 Gm13284-201ENSMUST00000121020 547 ntBASIC15.04■□□□□ -0
Hoxc9P09633 Gm11354-201ENSMUST00000121974 422 ntBASIC15.04■□□□□ -0
Hoxc9P09633 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hoxc9P09633 Gm24809-201ENSMUST00000175318 271 ntBASIC15.04■□□□□ -0
Hoxc9P09633 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hoxc9P09633 Gm44008-201ENSMUST00000204345 412 ntBASIC15.04■□□□□ -0
Hoxc9P09633 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hoxc9P09633 Gm6653-201ENSMUST00000218063 1288 ntBASIC15.04■□□□□ -0
Hoxc9P09633 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC15.04■□□□□ -0
Hoxc9P09633 AC158392.3-201ENSMUST00000224271 1284 ntBASIC15.04■□□□□ -0
Hoxc9P09633 AC130477.1-201ENSMUST00000226982 420 ntBASIC15.04■□□□□ -0
Hoxc9P09633 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC15.04■□□□□ -0
Hoxc9P09633 Paupar-201ENSMUST00000194826 3482 ntBASIC15.04■□□□□ -0
Hoxc9P09633 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hoxc9P09633 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.04■□□□□ -0
Hoxc9P09633 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hoxc9P09633 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Hoxc9P09633 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Hoxc9P09633 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 536 ms