Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.38□□□□□ -0.43
Hoxc8P09025 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.38□□□□□ -0.43
Hoxc8P09025 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hoxc8P09025 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Hoxc8P09025 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hoxc8P09025 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.37□□□□□ -0.43
Hoxc8P09025 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hoxc8P09025 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hoxc8P09025 Gm25562-201ENSMUST00000104608 133 ntBASIC12.37□□□□□ -0.43
Hoxc8P09025 Gm12389-201ENSMUST00000117696 418 ntBASIC12.37□□□□□ -0.43
Hoxc8P09025 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Hoxc8P09025 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.37□□□□□ -0.43
Hoxc8P09025 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.37□□□□□ -0.43
Hoxc8P09025 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Gm3329-201ENSMUST00000159873 556 ntBASIC12.37□□□□□ -0.43
Hoxc8P09025 Gm6423-201ENSMUST00000204315 934 ntBASIC12.37□□□□□ -0.43
Hoxc8P09025 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.37□□□□□ -0.43
Hoxc8P09025 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.37□□□□□ -0.43
Hoxc8P09025 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.37□□□□□ -0.43
Hoxc8P09025 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hoxc8P09025 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.37□□□□□ -0.43
Hoxc8P09025 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.37□□□□□ -0.43
Hoxc8P09025 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hoxc8P09025 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.37□□□□□ -0.43
Hoxc8P09025 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.37□□□□□ -0.43
Hoxc8P09025 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxc8P09025 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hoxc8P09025 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Hoxc8P09025 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Mir453-201ENSMUST00000104732 82 ntBASIC12.36□□□□□ -0.43
Hoxc8P09025 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.36□□□□□ -0.43
Hoxc8P09025 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Hoxc8P09025 Gm15003-201ENSMUST00000118884 446 ntBASIC12.36□□□□□ -0.43
Hoxc8P09025 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.36□□□□□ -0.43
Hoxc8P09025 Gm11354-201ENSMUST00000121974 422 ntBASIC12.36□□□□□ -0.43
Hoxc8P09025 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.36□□□□□ -0.43
Hoxc8P09025 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Hoxc8P09025 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Hoxc8P09025 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hoxc8P09025 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hoxc8P09025 Gm7719-201ENSMUST00000182374 975 ntBASIC12.36□□□□□ -0.43
Hoxc8P09025 Gm26976-201ENSMUST00000182929 908 ntBASIC12.36□□□□□ -0.43
Hoxc8P09025 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.36□□□□□ -0.43
Hoxc8P09025 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.36□□□□□ -0.43
Hoxc8P09025 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.36□□□□□ -0.43
Hoxc8P09025 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.36□□□□□ -0.43
Hoxc8P09025 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.36□□□□□ -0.43
Hoxc8P09025 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Hoxc8P09025 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Hoxc8P09025 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Hoxc8P09025 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms