Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TnfP06804 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TnfP06804 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.39□□□□□ -0.43
TnfP06804 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TnfP06804 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.39□□□□□ -0.43
TnfP06804 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
TnfP06804 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
TnfP06804 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.39□□□□□ -0.43
TnfP06804 Gm14942-201ENSMUST00000119642 336 ntBASIC12.39□□□□□ -0.43
TnfP06804 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
TnfP06804 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.39□□□□□ -0.43
TnfP06804 Gm7741-201ENSMUST00000181445 989 ntBASIC12.39□□□□□ -0.43
TnfP06804 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.39□□□□□ -0.43
TnfP06804 Gm27438-201ENSMUST00000183480 110 ntBASIC12.39□□□□□ -0.43
TnfP06804 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.39□□□□□ -0.43
TnfP06804 Gm37458-201ENSMUST00000194055 410 ntBASIC12.39□□□□□ -0.43
TnfP06804 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.39□□□□□ -0.43
TnfP06804 Gm44315-201ENSMUST00000203041 219 ntBASIC12.39□□□□□ -0.43
TnfP06804 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.39□□□□□ -0.43
TnfP06804 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.39□□□□□ -0.43
TnfP06804 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.39□□□□□ -0.43
TnfP06804 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.39□□□□□ -0.43
TnfP06804 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.39□□□□□ -0.43
TnfP06804 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TnfP06804 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TnfP06804 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.38□□□□□ -0.43
TnfP06804 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TnfP06804 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Gm23272-201ENSMUST00000104053 129 ntBASIC12.38□□□□□ -0.43
TnfP06804 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TnfP06804 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.38□□□□□ -0.43
TnfP06804 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.38□□□□□ -0.43
TnfP06804 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Gm12247-201ENSMUST00000117585 670 ntBASIC12.38□□□□□ -0.43
TnfP06804 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.38□□□□□ -0.43
TnfP06804 Gm12516-201ENSMUST00000120819 385 ntBASIC12.38□□□□□ -0.43
TnfP06804 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.38□□□□□ -0.43
TnfP06804 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
TnfP06804 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.38□□□□□ -0.43
TnfP06804 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.38□□□□□ -0.43
TnfP06804 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.38□□□□□ -0.43
TnfP06804 Gm2875-201ENSMUST00000211333 360 ntBASIC12.38□□□□□ -0.43
TnfP06804 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.38□□□□□ -0.43
TnfP06804 Gm18065-201ENSMUST00000221395 526 ntBASIC12.38□□□□□ -0.43
TnfP06804 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.38□□□□□ -0.43
TnfP06804 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.38□□□□□ -0.43
TnfP06804 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.38□□□□□ -0.43
TnfP06804 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.38□□□□□ -0.43
TnfP06804 Gm5451-201ENSMUST00000080545 579 ntBASIC12.38□□□□□ -0.43
TnfP06804 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.38□□□□□ -0.43
TnfP06804 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
TnfP06804 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.38□□□□□ -0.43
TnfP06804 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TnfP06804 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TnfP06804 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TnfP06804 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms