Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa4P06798 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa4P06798 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hoxa4P06798 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hoxa4P06798 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxa4P06798 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.51□□□□□ -0.57
Hoxa4P06798 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.51□□□□□ -0.57
Hoxa4P06798 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.51□□□□□ -0.57
Hoxa4P06798 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.51□□□□□ -0.57
Hoxa4P06798 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.51□□□□□ -0.57
Hoxa4P06798 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Gm21092-201ENSMUST00000178995 955 ntBASIC11.51□□□□□ -0.57
Hoxa4P06798 Gm9211-201ENSMUST00000182882 975 ntBASIC11.51□□□□□ -0.57
Hoxa4P06798 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.51□□□□□ -0.57
Hoxa4P06798 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.51□□□□□ -0.57
Hoxa4P06798 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxa4P06798 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Hoxa4P06798 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hoxa4P06798 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxa4P06798 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxa4P06798 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxa4P06798 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.51□□□□□ -0.57
Hoxa4P06798 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxa4P06798 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hoxa4P06798 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.51□□□□□ -0.57
Hoxa4P06798 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxa4P06798 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.5□□□□□ -0.57
Hoxa4P06798 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Hoxa4P06798 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Hoxa4P06798 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Hoxa4P06798 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Hoxa4P06798 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Hoxa4P06798 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.5□□□□□ -0.57
Hoxa4P06798 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.5□□□□□ -0.57
Hoxa4P06798 Gm15881-201ENSMUST00000148792 942 ntBASIC11.5□□□□□ -0.57
Hoxa4P06798 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Hoxa4P06798 Gm3329-201ENSMUST00000159873 556 ntBASIC11.5□□□□□ -0.57
Hoxa4P06798 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.5□□□□□ -0.57
Hoxa4P06798 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.5□□□□□ -0.57
Hoxa4P06798 Gm44100-201ENSMUST00000204329 436 ntBASIC11.5□□□□□ -0.57
Hoxa4P06798 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Hoxa4P06798 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.5□□□□□ -0.57
Hoxa4P06798 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.5□□□□□ -0.57
Hoxa4P06798 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hoxa4P06798 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hoxa4P06798 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hoxa4P06798 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Olfr584-201ENSMUST00000098210 964 ntBASIC11.5□□□□□ -0.57
Hoxa4P06798 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxa4P06798 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms