Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.26□□□□□ -0.77
P04224 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.26□□□□□ -0.77
P04224 Gm15806-201ENSMUST00000120696 955 ntBASIC10.26□□□□□ -0.77
P04224 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.26□□□□□ -0.77
P04224 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.26□□□□□ -0.77
P04224 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.26□□□□□ -0.77
P04224 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.26□□□□□ -0.77
P04224 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
P04224 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
P04224 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.26□□□□□ -0.77
P04224 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.26□□□□□ -0.77
P04224 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
P04224 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.26□□□□□ -0.77
P04224 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.26□□□□□ -0.77
P04224 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.25□□□□□ -0.77
P04224 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
P04224 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.25□□□□□ -0.77
P04224 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.25□□□□□ -0.77
P04224 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
P04224 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.25□□□□□ -0.77
P04224 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.25□□□□□ -0.77
P04224 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
P04224 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Gm12502-201ENSMUST00000120197 444 ntBASIC10.25□□□□□ -0.77
P04224 Gm13315-201ENSMUST00000120376 991 ntBASIC10.25□□□□□ -0.77
P04224 Gm9083-201ENSMUST00000120423 819 ntBASIC10.25□□□□□ -0.77
P04224 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.25□□□□□ -0.77
P04224 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.25□□□□□ -0.77
P04224 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.25□□□□□ -0.77
P04224 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.25□□□□□ -0.77
P04224 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.25□□□□□ -0.77
P04224 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.25□□□□□ -0.77
P04224 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Gm22058-201ENSMUST00000083393 310 ntBASIC10.25□□□□□ -0.77
P04224 Gm10268-201ENSMUST00000085340 555 ntBASIC10.25□□□□□ -0.77
P04224 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.25□□□□□ -0.77
P04224 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
P04224 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
P04224 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.25□□□□□ -0.77
P04224 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.25□□□□□ -0.77
P04224 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
P04224 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
P04224 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P04224 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms